Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 NME4-202ENST00000382940 766 ntTSL 3 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 TUBB8P6-201ENST00000436895 1288 ntBASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 RAP2CP1-201ENST00000605103 478 ntBASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 MYO5B-201ENST00000285039 9505 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 CSPG4P13-202ENST00000567704 4801 ntBASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 NCAM1-225ENST00000618266 5937 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
SPTSSBQ8NFR3 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 ARHGAP23P1-201ENST00000562773 1937 ntBASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 AL499627.1-201ENST00000569373 2188 ntBASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC9.15□□□□□ -0.94
SPTSSBQ8NFR3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC9.15□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms