Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 KRT8P39-201ENST00000396270 1433 ntBASIC16.13■□□□□ 0.17
KRT78Q8N1N4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.13■□□□□ 0.17
KRT78Q8N1N4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.13■□□□□ 0.17
KRT78Q8N1N4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.13■□□□□ 0.17
KRT78Q8N1N4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 AC012569.1-201ENST00000591191 1524 ntBASIC16.13■□□□□ 0.17
KRT78Q8N1N4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT78Q8N1N4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 FDX1P1-201ENST00000449115 551 ntBASIC16.12■□□□□ 0.17
KRT78Q8N1N4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT78Q8N1N4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 AL513480.1-201ENST00000451731 511 ntBASIC16.11■□□□□ 0.17
KRT78Q8N1N4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 AC145285.3-201ENST00000564603 959 ntBASIC16.11■□□□□ 0.17
KRT78Q8N1N4 MIR4515-201ENST00000584082 81 ntBASIC16.11■□□□□ 0.17
KRT78Q8N1N4 ACTL9-202ENST00000612068 1252 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms