Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 PCDHB18P-201ENST00000524813 2368 ntBASIC18.56■□□□□ 0.56
TRIM50Q86XT4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM50Q86XT4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 AL035633.1-201ENST00000406139 838 ntBASIC18.55■□□□□ 0.56
TRIM50Q86XT4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 KRT18P34-201ENST00000488218 1270 ntBASIC18.55■□□□□ 0.56
TRIM50Q86XT4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 MIR4453-201ENST00000584019 89 ntBASIC18.55■□□□□ 0.56
TRIM50Q86XT4 AL390754.1-201ENST00000619088 582 ntBASIC18.55■□□□□ 0.56
TRIM50Q86XT4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM50Q86XT4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 OR6D1P-203ENST00000641209 4860 ntBASIC18.54■□□□□ 0.56
TRIM50Q86XT4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 SPDYE7P-202ENST00000420373 878 ntBASIC18.54■□□□□ 0.56
TRIM50Q86XT4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 AC140878.1-201ENST00000565277 250 ntBASIC18.54■□□□□ 0.56
TRIM50Q86XT4 MIR4745-201ENST00000577608 62 ntBASIC18.54■□□□□ 0.56
TRIM50Q86XT4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 AC013467.2-201ENST00000605472 835 ntBASIC18.54■□□□□ 0.56
TRIM50Q86XT4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRIM50Q86XT4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TRIM50Q86XT4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms