Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP45Q70EL2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP45Q70EL2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.71■□□□□ 0.27
USP45Q70EL2 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP45Q70EL2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP45Q70EL2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP45Q70EL2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
USP45Q70EL2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.71■□□□□ 0.27
USP45Q70EL2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
USP45Q70EL2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP45Q70EL2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USP45Q70EL2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
USP45Q70EL2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP45Q70EL2 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
USP45Q70EL2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.7■□□□□ 0.26
USP45Q70EL2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.7■□□□□ 0.26
USP45Q70EL2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP45Q70EL2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP45Q70EL2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.7■□□□□ 0.26
USP45Q70EL2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
USP45Q70EL2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP45Q70EL2 PRORSD1P-202ENST00000563365 2154 ntBASIC16.7■□□□□ 0.26
USP45Q70EL2 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP45Q70EL2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USP45Q70EL2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.7■□□□□ 0.26
USP45Q70EL2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USP45Q70EL2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.7■□□□□ 0.26
USP45Q70EL2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP45Q70EL2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
USP45Q70EL2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP45Q70EL2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP45Q70EL2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USP45Q70EL2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.7■□□□□ 0.26
USP45Q70EL2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.7■□□□□ 0.26
USP45Q70EL2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.7■□□□□ 0.26
USP45Q70EL2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.7■□□□□ 0.26
USP45Q70EL2 RN7SL589P-201ENST00000481268 310 ntBASIC16.7■□□□□ 0.26
USP45Q70EL2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
USP45Q70EL2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.7■□□□□ 0.26
USP45Q70EL2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.7■□□□□ 0.26
USP45Q70EL2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
USP45Q70EL2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.7■□□□□ 0.26
USP45Q70EL2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.7■□□□□ 0.26
USP45Q70EL2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
USP45Q70EL2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.7■□□□□ 0.26
USP45Q70EL2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP45Q70EL2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
USP45Q70EL2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.7■□□□□ 0.26
USP45Q70EL2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP45Q70EL2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
USP45Q70EL2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
USP45Q70EL2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.7■□□□□ 0.26
USP45Q70EL2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
USP45Q70EL2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP45Q70EL2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
USP45Q70EL2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP45Q70EL2 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP45Q70EL2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.7■□□□□ 0.26
USP45Q70EL2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
USP45Q70EL2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP45Q70EL2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
USP45Q70EL2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP45Q70EL2 WASH6P-202ENST00000359512 1437 ntBASIC16.7■□□□□ 0.26
USP45Q70EL2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USP45Q70EL2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP45Q70EL2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP45Q70EL2 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP45Q70EL2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.69■□□□□ 0.26
USP45Q70EL2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.69■□□□□ 0.26
USP45Q70EL2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
USP45Q70EL2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP45Q70EL2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USP45Q70EL2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.69■□□□□ 0.26
USP45Q70EL2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
USP45Q70EL2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
USP45Q70EL2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP45Q70EL2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP45Q70EL2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.69■□□□□ 0.26
USP45Q70EL2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP45Q70EL2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USP45Q70EL2 AC211486.1-202ENST00000416371 468 ntBASIC16.69■□□□□ 0.26
USP45Q70EL2 AL671277.1-201ENST00000429656 993 ntBASIC16.69■□□□□ 0.26
USP45Q70EL2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.69■□□□□ 0.26
USP45Q70EL2 AC211476.1-201ENST00000503899 468 ntBASIC16.69■□□□□ 0.26
USP45Q70EL2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
USP45Q70EL2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.69■□□□□ 0.26
USP45Q70EL2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
USP45Q70EL2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.69■□□□□ 0.26
USP45Q70EL2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USP45Q70EL2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USP45Q70EL2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
USP45Q70EL2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.69■□□□□ 0.26
USP45Q70EL2 AL512652.2-201ENST00000625156 1716 ntBASIC16.69■□□□□ 0.26
USP45Q70EL2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USP45Q70EL2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.69■□□□□ 0.26
USP45Q70EL2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
USP45Q70EL2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP45Q70EL2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP45Q70EL2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP45Q70EL2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms