Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 IGHV3-22-201ENST00000520721 359 ntBASIC19.94■□□□□ 0.78
RNF20Q5VTR2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 ACTL9-202ENST00000612068 1252 ntBASIC19.94■□□□□ 0.78
RNF20Q5VTR2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 AC006449.5-201ENST00000610658 2098 ntBASIC19.94■□□□□ 0.78
RNF20Q5VTR2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 HLA-A-201ENST00000376802 1334 ntBASIC19.94■□□□□ 0.78
RNF20Q5VTR2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 VN2R19P-201ENST00000442399 1052 ntBASIC19.93■□□□□ 0.78
RNF20Q5VTR2 AC009947.1-201ENST00000444350 727 ntBASIC19.93■□□□□ 0.78
RNF20Q5VTR2 RNA5SP415-201ENST00000517246 115 ntBASIC19.93■□□□□ 0.78
RNF20Q5VTR2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 MIR4515-201ENST00000584082 81 ntBASIC19.93■□□□□ 0.78
RNF20Q5VTR2 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.93■□□□□ 0.78
RNF20Q5VTR2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF20Q5VTR2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 CRYGEP-201ENST00000412192 528 ntBASIC19.92■□□□□ 0.78
RNF20Q5VTR2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 GGT4P-201ENST00000623672 1708 ntBASIC19.92■□□□□ 0.78
RNF20Q5VTR2 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RNF20Q5VTR2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF20Q5VTR2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms