Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF220Q5VTB9 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF220Q5VTB9 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF220Q5VTB9 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF220Q5VTB9 AC005332.1-201ENST00000577698 1310 ntBASIC16.15■□□□□ 0.18
RNF220Q5VTB9 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF220Q5VTB9 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF220Q5VTB9 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RNF220Q5VTB9 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
RNF220Q5VTB9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
RNF220Q5VTB9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.14■□□□□ 0.18
RNF220Q5VTB9 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 KRT18P21-201ENST00000515767 1272 ntBASIC16.14■□□□□ 0.17
RNF220Q5VTB9 IGHV3-52-201ENST00000519770 353 ntBASIC16.14■□□□□ 0.17
RNF220Q5VTB9 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF220Q5VTB9 LINC02012-201ENST00000608206 1725 ntBASIC16.14■□□□□ 0.17
RNF220Q5VTB9 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 FAM220CP-201ENST00000395253 831 ntBASIC16.13■□□□□ 0.17
RNF220Q5VTB9 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 CHCHD2P8-201ENST00000429873 447 ntBASIC16.13■□□□□ 0.17
RNF220Q5VTB9 BX276092.5-203ENST00000456199 560 ntBASIC16.13■□□□□ 0.17
RNF220Q5VTB9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 AL049597.2-201ENST00000565575 961 ntBASIC16.13■□□□□ 0.17
RNF220Q5VTB9 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 AL121672.3-201ENST00000608644 468 ntBASIC16.13■□□□□ 0.17
RNF220Q5VTB9 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF220Q5VTB9 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF220Q5VTB9 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF220Q5VTB9 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF220Q5VTB9 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF220Q5VTB9 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms