Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RC3H1Q5TC82 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
RC3H1Q5TC82 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RC3H1Q5TC82 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.72■□□□□ 0.91
RC3H1Q5TC82 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RC3H1Q5TC82 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RC3H1Q5TC82 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RC3H1Q5TC82 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.72■□□□□ 0.91
RC3H1Q5TC82 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RC3H1Q5TC82 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
RC3H1Q5TC82 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RC3H1Q5TC82 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC20.72■□□□□ 0.91
RC3H1Q5TC82 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
RC3H1Q5TC82 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
RC3H1Q5TC82 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC20.72■□□□□ 0.91
RC3H1Q5TC82 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RC3H1Q5TC82 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
RC3H1Q5TC82 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.72■□□□□ 0.91
RC3H1Q5TC82 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC20.72■□□□□ 0.91
RC3H1Q5TC82 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RC3H1Q5TC82 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RC3H1Q5TC82 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RC3H1Q5TC82 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RC3H1Q5TC82 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.72■□□□□ 0.91
RC3H1Q5TC82 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RC3H1Q5TC82 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.72■□□□□ 0.91
RC3H1Q5TC82 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RC3H1Q5TC82 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RC3H1Q5TC82 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 DEK-201ENST00000244776 1441 ntTSL 2 BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 AL391256.1-201ENST00000443260 1855 ntBASIC20.71■□□□□ 0.91
RC3H1Q5TC82 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 HIST3H2BA-201ENST00000436555 524 ntBASIC20.71■□□□□ 0.91
RC3H1Q5TC82 AC092552.1-201ENST00000547243 906 ntBASIC20.71■□□□□ 0.91
RC3H1Q5TC82 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 REXO1L6P-201ENST00000603433 1515 ntBASIC20.71■□□□□ 0.91
RC3H1Q5TC82 GPAA1P2-202ENST00000606848 1787 ntBASIC20.71■□□□□ 0.91
RC3H1Q5TC82 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 CROCCP2-202ENST00000412962 2773 ntBASIC20.71■□□□□ 0.91
RC3H1Q5TC82 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RC3H1Q5TC82 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
RC3H1Q5TC82 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.7■□□□□ 0.9
RC3H1Q5TC82 CDC14C-201ENST00000428251 1719 ntBASIC20.7■□□□□ 0.9
RC3H1Q5TC82 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RC3H1Q5TC82 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RC3H1Q5TC82 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RC3H1Q5TC82 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RC3H1Q5TC82 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RC3H1Q5TC82 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RC3H1Q5TC82 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RC3H1Q5TC82 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RC3H1Q5TC82 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RC3H1Q5TC82 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.7■□□□□ 0.9
RC3H1Q5TC82 AP002490.2-201ENST00000524791 560 ntBASIC20.7■□□□□ 0.9
RC3H1Q5TC82 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.7■□□□□ 0.9
RC3H1Q5TC82 TIMM17BP1-201ENST00000545713 516 ntBASIC20.7■□□□□ 0.9
RC3H1Q5TC82 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
RC3H1Q5TC82 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC20.7■□□□□ 0.9
RC3H1Q5TC82 RPSAP52-203ENST00000622976 1023 ntBASIC20.7■□□□□ 0.9
RC3H1Q5TC82 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.7■□□□□ 0.9
RC3H1Q5TC82 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RC3H1Q5TC82 AC134043.2-201ENST00000624206 2238 ntBASIC20.7■□□□□ 0.9
RC3H1Q5TC82 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.7■□□□□ 0.9
RC3H1Q5TC82 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RC3H1Q5TC82 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RC3H1Q5TC82 AC092068.3-201ENST00000587894 2016 ntBASIC20.7■□□□□ 0.9
RC3H1Q5TC82 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RC3H1Q5TC82 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RC3H1Q5TC82 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RC3H1Q5TC82 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RC3H1Q5TC82 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RC3H1Q5TC82 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RC3H1Q5TC82 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RC3H1Q5TC82 ANKRD19P-201ENST00000338192 862 ntBASIC20.69■□□□□ 0.9
RC3H1Q5TC82 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RC3H1Q5TC82 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.69■□□□□ 0.9
RC3H1Q5TC82 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC20.69■□□□□ 0.9
RC3H1Q5TC82 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.69■□□□□ 0.9
RC3H1Q5TC82 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RC3H1Q5TC82 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RC3H1Q5TC82 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms