Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.22□□□□□ -0.13
EFNB3Q15768 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
EFNB3Q15768 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.22□□□□□ -0.13
EFNB3Q15768 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.22□□□□□ -0.13
EFNB3Q15768 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.22□□□□□ -0.13
EFNB3Q15768 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.22□□□□□ -0.13
EFNB3Q15768 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.22□□□□□ -0.13
EFNB3Q15768 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.22□□□□□ -0.13
EFNB3Q15768 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 AC011676.5-201ENST00000624864 2660 ntBASIC14.22□□□□□ -0.13
EFNB3Q15768 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
EFNB3Q15768 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.22□□□□□ -0.13
EFNB3Q15768 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.22□□□□□ -0.13
EFNB3Q15768 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
EFNB3Q15768 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB3Q15768 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
EFNB3Q15768 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.21□□□□□ -0.13
EFNB3Q15768 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB3Q15768 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB3Q15768 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB3Q15768 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB3Q15768 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB3Q15768 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.21□□□□□ -0.13
EFNB3Q15768 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB3Q15768 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.21□□□□□ -0.13
EFNB3Q15768 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
EFNB3Q15768 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.21□□□□□ -0.13
EFNB3Q15768 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB3Q15768 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB3Q15768 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
EFNB3Q15768 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB3Q15768 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
EFNB3Q15768 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.21□□□□□ -0.13
EFNB3Q15768 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.21□□□□□ -0.13
EFNB3Q15768 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.21□□□□□ -0.13
EFNB3Q15768 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB3Q15768 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.21□□□□□ -0.13
EFNB3Q15768 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB3Q15768 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.21□□□□□ -0.13
EFNB3Q15768 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB3Q15768 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
EFNB3Q15768 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.21□□□□□ -0.13
EFNB3Q15768 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.21□□□□□ -0.13
EFNB3Q15768 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB3Q15768 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB3Q15768 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB3Q15768 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
EFNB3Q15768 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB3Q15768 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB3Q15768 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB3Q15768 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
EFNB3Q15768 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB3Q15768 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB3Q15768 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB3Q15768 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
EFNB3Q15768 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.21□□□□□ -0.14
EFNB3Q15768 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
EFNB3Q15768 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
EFNB3Q15768 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
EFNB3Q15768 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
EFNB3Q15768 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
EFNB3Q15768 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
EFNB3Q15768 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
EFNB3Q15768 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB3Q15768 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
EFNB3Q15768 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB3Q15768 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB3Q15768 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB3Q15768 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB3Q15768 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
EFNB3Q15768 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB3Q15768 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB3Q15768 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.2□□□□□ -0.14
EFNB3Q15768 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
EFNB3Q15768 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB3Q15768 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
EFNB3Q15768 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNB3Q15768 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB3Q15768 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
EFNB3Q15768 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB3Q15768 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB3Q15768 MIR346-201ENST00000362234 95 ntBASIC14.2□□□□□ -0.14
EFNB3Q15768 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.2□□□□□ -0.14
EFNB3Q15768 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms