Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCAPQ12770 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.19■□□□□ 0.34
SCAPQ12770 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.19■□□□□ 0.34
SCAPQ12770 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SCAPQ12770 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SCAPQ12770 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.19■□□□□ 0.34
SCAPQ12770 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.19■□□□□ 0.34
SCAPQ12770 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCAPQ12770 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCAPQ12770 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SCAPQ12770 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCAPQ12770 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCAPQ12770 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCAPQ12770 LINC01144-201ENST00000626198 1710 ntBASIC17.18■□□□□ 0.34
SCAPQ12770 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCAPQ12770 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCAPQ12770 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
SCAPQ12770 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCAPQ12770 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.18■□□□□ 0.34
SCAPQ12770 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCAPQ12770 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SCAPQ12770 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.18■□□□□ 0.34
SCAPQ12770 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SCAPQ12770 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SCAPQ12770 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCAPQ12770 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SCAPQ12770 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCAPQ12770 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SCAPQ12770 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCAPQ12770 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SCAPQ12770 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCAPQ12770 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCAPQ12770 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.18■□□□□ 0.34
SCAPQ12770 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SCAPQ12770 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.18■□□□□ 0.34
SCAPQ12770 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.18■□□□□ 0.34
SCAPQ12770 AC112191.1-201ENST00000523689 701 ntBASIC17.18■□□□□ 0.34
SCAPQ12770 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SCAPQ12770 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.18■□□□□ 0.34
SCAPQ12770 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SCAPQ12770 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SCAPQ12770 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.18■□□□□ 0.34
SCAPQ12770 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.18■□□□□ 0.34
SCAPQ12770 AC099522.2-201ENST00000607001 744 ntBASIC17.18■□□□□ 0.34
SCAPQ12770 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.18■□□□□ 0.34
SCAPQ12770 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SCAPQ12770 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCAPQ12770 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
SCAPQ12770 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCAPQ12770 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCAPQ12770 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCAPQ12770 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCAPQ12770 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCAPQ12770 ALOX12P2-203ENST00000570921 1945 ntBASIC17.17■□□□□ 0.34
SCAPQ12770 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCAPQ12770 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCAPQ12770 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCAPQ12770 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SCAPQ12770 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.17■□□□□ 0.34
SCAPQ12770 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.17■□□□□ 0.34
SCAPQ12770 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCAPQ12770 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SCAPQ12770 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SCAPQ12770 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SCAPQ12770 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.17■□□□□ 0.34
SCAPQ12770 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SCAPQ12770 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.17■□□□□ 0.34
SCAPQ12770 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.17■□□□□ 0.34
SCAPQ12770 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
SCAPQ12770 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
SCAPQ12770 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SCAPQ12770 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.17■□□□□ 0.34
SCAPQ12770 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SCAPQ12770 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SCAPQ12770 SPCS2P1-201ENST00000561636 679 ntBASIC17.17■□□□□ 0.34
SCAPQ12770 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.17■□□□□ 0.34
SCAPQ12770 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.17■□□□□ 0.34
SCAPQ12770 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCAPQ12770 AL078644.1-201ENST00000609881 752 ntBASIC17.17■□□□□ 0.34
SCAPQ12770 AL161645.1-201ENST00000622716 1255 ntBASIC17.17■□□□□ 0.34
SCAPQ12770 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCAPQ12770 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCAPQ12770 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SCAPQ12770 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCAPQ12770 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.17■□□□□ 0.34
SCAPQ12770 AC099398.1-201ENST00000567919 2776 ntBASIC17.17■□□□□ 0.34
SCAPQ12770 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCAPQ12770 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SCAPQ12770 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCAPQ12770 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCAPQ12770 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SCAPQ12770 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCAPQ12770 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCAPQ12770 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SCAPQ12770 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.16■□□□□ 0.34
SCAPQ12770 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SCAPQ12770 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
SCAPQ12770 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
SCAPQ12770 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.16■□□□□ 0.34
SCAPQ12770 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms