Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SNRPEP62304 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SNRPEP62304 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.77□□□□□ -0.36
SNRPEP62304 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SNRPEP62304 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SNRPEP62304 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
SNRPEP62304 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.77□□□□□ -0.37
SNRPEP62304 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SNRPEP62304 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SNRPEP62304 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNRPEP62304 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
SNRPEP62304 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SNRPEP62304 MIR572-201ENST00000384983 95 ntBASIC12.77□□□□□ -0.37
SNRPEP62304 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNRPEP62304 PBX1-209ENST00000485769 834 ntTSL 2 BASIC12.77□□□□□ -0.37
SNRPEP62304 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC12.77□□□□□ -0.37
SNRPEP62304 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNRPEP62304 MPST-208ENST00000628507 698 ntTSL 5 BASIC12.77□□□□□ -0.37
SNRPEP62304 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNRPEP62304 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SNRPEP62304 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNRPEP62304 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SNRPEP62304 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.77□□□□□ -0.37
SNRPEP62304 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNRPEP62304 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
SNRPEP62304 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SNRPEP62304 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.77□□□□□ -0.37
SNRPEP62304 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SNRPEP62304 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SNRPEP62304 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SNRPEP62304 AC089987.1-201ENST00000551654 2209 ntBASIC12.77□□□□□ -0.37
SNRPEP62304 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
SNRPEP62304 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNRPEP62304 AL163051.1-201ENST00000569214 1512 ntBASIC12.77□□□□□ -0.37
SNRPEP62304 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNRPEP62304 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.77□□□□□ -0.37
SNRPEP62304 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC12.76□□□□□ -0.37
SNRPEP62304 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SNRPEP62304 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.76□□□□□ -0.37
SNRPEP62304 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SNRPEP62304 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
SNRPEP62304 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
SNRPEP62304 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SNRPEP62304 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SNRPEP62304 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SNRPEP62304 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SNRPEP62304 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SNRPEP62304 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SNRPEP62304 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 DDX43P3-201ENST00000441064 443 ntBASIC12.76□□□□□ -0.37
SNRPEP62304 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
SNRPEP62304 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SNRPEP62304 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC12.76□□□□□ -0.37
SNRPEP62304 UNC93B8-201ENST00000511903 705 ntBASIC12.76□□□□□ -0.37
SNRPEP62304 AP002490.2-201ENST00000524791 560 ntBASIC12.76□□□□□ -0.37
SNRPEP62304 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 AC016405.3-201ENST00000607710 860 ntBASIC12.76□□□□□ -0.37
SNRPEP62304 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC12.76□□□□□ -0.37
SNRPEP62304 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.76□□□□□ -0.37
SNRPEP62304 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SNRPEP62304 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SNRPEP62304 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SNRPEP62304 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.76□□□□□ -0.37
SNRPEP62304 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
SNRPEP62304 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SNRPEP62304 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SNRPEP62304 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SNRPEP62304 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.76□□□□□ -0.37
SNRPEP62304 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC12.76□□□□□ -0.37
SNRPEP62304 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.76□□□□□ -0.37
SNRPEP62304 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
SNRPEP62304 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.76□□□□□ -0.37
SNRPEP62304 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SNRPEP62304 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNRPEP62304 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SNRPEP62304 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms