Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 MESTP1-201ENST00000404287 994 ntBASIC13.04□□□□□ -0.32
ERVFC1-1P60608 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 DGCR10-201ENST00000609839 495 ntBASIC13.04□□□□□ -0.32
ERVFC1-1P60608 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 MIR1224-201ENST00000408193 85 ntBASIC13.03□□□□□ -0.32
ERVFC1-1P60608 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ERVFC1-1P60608 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ERVFC1-1P60608 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ERVFC1-1P60608 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms