Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.49■□□□□ 0.23
CDKN2DP55273 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN2DP55273 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.49■□□□□ 0.23
CDKN2DP55273 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN2DP55273 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN2DP55273 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.49■□□□□ 0.23
CDKN2DP55273 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CDKN2DP55273 FAM185BP-201ENST00000443595 716 ntBASIC16.49■□□□□ 0.23
CDKN2DP55273 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN2DP55273 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN2DP55273 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
CDKN2DP55273 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.49■□□□□ 0.23
CDKN2DP55273 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.49■□□□□ 0.23
CDKN2DP55273 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.49■□□□□ 0.23
CDKN2DP55273 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.49■□□□□ 0.23
CDKN2DP55273 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.49■□□□□ 0.23
CDKN2DP55273 AP001350.2-201ENST00000625104 1094 ntBASIC16.49■□□□□ 0.23
CDKN2DP55273 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CDKN2DP55273 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.49■□□□□ 0.23
CDKN2DP55273 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN2DP55273 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN2DP55273 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN2DP55273 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN2DP55273 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN2DP55273 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.49■□□□□ 0.23
CDKN2DP55273 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN2DP55273 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN2DP55273 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.49■□□□□ 0.23
CDKN2DP55273 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.49■□□□□ 0.23
CDKN2DP55273 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.49■□□□□ 0.23
CDKN2DP55273 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CDKN2DP55273 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKN2DP55273 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN2DP55273 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN2DP55273 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN2DP55273 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN2DP55273 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.48■□□□□ 0.23
CDKN2DP55273 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN2DP55273 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN2DP55273 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN2DP55273 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN2DP55273 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
CDKN2DP55273 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN2DP55273 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN2DP55273 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.48■□□□□ 0.23
CDKN2DP55273 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN2DP55273 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
CDKN2DP55273 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN2DP55273 AC098831.1-202ENST00000438821 336 ntBASIC16.48■□□□□ 0.23
CDKN2DP55273 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN2DP55273 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.48■□□□□ 0.23
CDKN2DP55273 AC108751.1-201ENST00000490852 363 ntBASIC16.48■□□□□ 0.23
CDKN2DP55273 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.48■□□□□ 0.23
CDKN2DP55273 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.48■□□□□ 0.23
CDKN2DP55273 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.48■□□□□ 0.23
CDKN2DP55273 AC010654.1-201ENST00000615722 808 ntBASIC16.48■□□□□ 0.23
CDKN2DP55273 AC116407.3-201ENST00000623905 1129 ntBASIC16.48■□□□□ 0.23
CDKN2DP55273 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.48■□□□□ 0.23
CDKN2DP55273 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.48■□□□□ 0.23
CDKN2DP55273 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN2DP55273 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.48■□□□□ 0.23
CDKN2DP55273 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN2DP55273 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN2DP55273 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.48■□□□□ 0.23
CDKN2DP55273 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN2DP55273 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN2DP55273 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.48■□□□□ 0.23
CDKN2DP55273 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.48■□□□□ 0.23
CDKN2DP55273 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN2DP55273 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKN2DP55273 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.47■□□□□ 0.23
CDKN2DP55273 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CDKN2DP55273 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDKN2DP55273 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.47■□□□□ 0.23
CDKN2DP55273 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CDKN2DP55273 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.47■□□□□ 0.23
CDKN2DP55273 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDKN2DP55273 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
CDKN2DP55273 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.47■□□□□ 0.23
CDKN2DP55273 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDKN2DP55273 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDKN2DP55273 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDKN2DP55273 AC012569.1-201ENST00000591191 1524 ntBASIC16.47■□□□□ 0.23
CDKN2DP55273 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDKN2DP55273 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.47■□□□□ 0.23
CDKN2DP55273 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.47■□□□□ 0.23
CDKN2DP55273 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.47■□□□□ 0.23
CDKN2DP55273 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.47■□□□□ 0.23
CDKN2DP55273 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.47■□□□□ 0.23
CDKN2DP55273 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.47■□□□□ 0.23
CDKN2DP55273 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.47■□□□□ 0.23
CDKN2DP55273 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.47■□□□□ 0.23
CDKN2DP55273 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDKN2DP55273 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDKN2DP55273 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.47■□□□□ 0.23
CDKN2DP55273 PCGF3-213ENST00000620529 1899 ntBASIC16.47■□□□□ 0.23
CDKN2DP55273 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDKN2DP55273 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CDKN2DP55273 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDKN2DP55273 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms