Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ZNF140P52738 PGAM5P1-201ENST00000518923 814 ntBASIC16.57■□□□□ 0.24
ZNF140P52738 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ZNF140P52738 AP002472.1-201ENST00000577490 586 ntBASIC16.57■□□□□ 0.24
ZNF140P52738 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.57■□□□□ 0.24
ZNF140P52738 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF140P52738 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF140P52738 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF140P52738 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF140P52738 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF140P52738 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF140P52738 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF140P52738 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
ZNF140P52738 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF140P52738 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF140P52738 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF140P52738 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ZNF140P52738 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF140P52738 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.56■□□□□ 0.24
ZNF140P52738 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
ZNF140P52738 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.56■□□□□ 0.24
ZNF140P52738 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ZNF140P52738 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
ZNF140P52738 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.56■□□□□ 0.24
ZNF140P52738 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF140P52738 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF140P52738 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
ZNF140P52738 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF140P52738 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.56■□□□□ 0.24
ZNF140P52738 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF140P52738 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF140P52738 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF140P52738 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF140P52738 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF140P52738 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF140P52738 MIR940-201ENST00000401276 94 ntBASIC16.56■□□□□ 0.24
ZNF140P52738 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF140P52738 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF140P52738 POLD2P1-201ENST00000511220 997 ntBASIC16.56■□□□□ 0.24
ZNF140P52738 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF140P52738 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.56■□□□□ 0.24
ZNF140P52738 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.56■□□□□ 0.24
ZNF140P52738 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF140P52738 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF140P52738 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.56■□□□□ 0.24
ZNF140P52738 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.56■□□□□ 0.24
ZNF140P52738 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ZNF140P52738 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.56■□□□□ 0.24
ZNF140P52738 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF140P52738 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF140P52738 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF140P52738 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
ZNF140P52738 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
ZNF140P52738 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ZNF140P52738 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF140P52738 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF140P52738 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF140P52738 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF140P52738 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF140P52738 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ZNF140P52738 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF140P52738 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
ZNF140P52738 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF140P52738 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF140P52738 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
ZNF140P52738 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.55■□□□□ 0.24
ZNF140P52738 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF140P52738 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF140P52738 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.55■□□□□ 0.24
ZNF140P52738 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF140P52738 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.55■□□□□ 0.24
ZNF140P52738 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF140P52738 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF140P52738 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ZNF140P52738 AC023274.1-201ENST00000418278 595 ntBASIC16.55■□□□□ 0.24
ZNF140P52738 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.55■□□□□ 0.24
ZNF140P52738 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.55■□□□□ 0.24
ZNF140P52738 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
ZNF140P52738 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.55■□□□□ 0.24
ZNF140P52738 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.55■□□□□ 0.24
ZNF140P52738 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF140P52738 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ZNF140P52738 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.55■□□□□ 0.24
ZNF140P52738 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF140P52738 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
ZNF140P52738 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.55■□□□□ 0.24
ZNF140P52738 CYP2T1P-202ENST00000641596 2535 ntBASIC16.55■□□□□ 0.24
ZNF140P52738 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF140P52738 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
ZNF140P52738 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF140P52738 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF140P52738 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF140P52738 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ZNF140P52738 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ZNF140P52738 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF140P52738 AC079328.2-201ENST00000561241 3354 ntBASIC16.54■□□□□ 0.24
ZNF140P52738 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF140P52738 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF140P52738 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF140P52738 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms