Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MINOS1P3-201ENST00000457048 203 ntBASIC14.76□□□□□ -0.05
SOX2P48431 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.76□□□□□ -0.05
SOX2P48431 HLA-J-202ENST00000469281 1241 ntBASIC14.76□□□□□ -0.05
SOX2P48431 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.76□□□□□ -0.05
SOX2P48431 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.76□□□□□ -0.05
SOX2P48431 AL136038.3-201ENST00000561909 1096 ntBASIC14.76□□□□□ -0.05
SOX2P48431 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SOX2P48431 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.76□□□□□ -0.05
SOX2P48431 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SOX2P48431 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SOX2P48431 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.76□□□□□ -0.05
SOX2P48431 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SOX2P48431 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SOX2P48431 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SOX2P48431 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.76□□□□□ -0.05
SOX2P48431 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SOX2P48431 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SOX2P48431 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SOX2P48431 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.76□□□□□ -0.05
SOX2P48431 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SOX2P48431 PMPCAP1-201ENST00000508114 1576 ntBASIC14.76□□□□□ -0.05
SOX2P48431 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SOX2P48431 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SOX2P48431 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SOX2P48431 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.76□□□□□ -0.05
SOX2P48431 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SOX2P48431 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SOX2P48431 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.76□□□□□ -0.05
SOX2P48431 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.76□□□□□ -0.05
SOX2P48431 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SOX2P48431 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.76□□□□□ -0.05
SOX2P48431 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SOX2P48431 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.75□□□□□ -0.05
SOX2P48431 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.75□□□□□ -0.05
SOX2P48431 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.75□□□□□ -0.05
SOX2P48431 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.75□□□□□ -0.05
SOX2P48431 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.75□□□□□ -0.05
SOX2P48431 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.75□□□□□ -0.05
SOX2P48431 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.75□□□□□ -0.05
SOX2P48431 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
SOX2P48431 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SOX2P48431 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
SOX2P48431 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.75□□□□□ -0.05
SOX2P48431 DUX4L26-201ENST00000489078 1255 ntBASIC14.75□□□□□ -0.05
SOX2P48431 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 AL121672.3-201ENST00000608644 468 ntBASIC14.75□□□□□ -0.05
SOX2P48431 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.75□□□□□ -0.05
SOX2P48431 MTHFR-217ENST00000641820 1569 ntBASIC14.75□□□□□ -0.05
SOX2P48431 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 AP002414.2-201ENST00000591780 3365 ntBASIC14.75□□□□□ -0.05
SOX2P48431 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.75□□□□□ -0.05
SOX2P48431 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
SOX2P48431 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SOX2P48431 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.75□□□□□ -0.05
SOX2P48431 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SOX2P48431 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.75□□□□□ -0.05
SOX2P48431 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.75□□□□□ -0.05
SOX2P48431 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SOX2P48431 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SOX2P48431 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SOX2P48431 INTS4P1-201ENST00000438455 1935 ntBASIC14.74□□□□□ -0.05
SOX2P48431 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SOX2P48431 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SOX2P48431 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SOX2P48431 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SOX2P48431 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.74□□□□□ -0.05
SOX2P48431 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SOX2P48431 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SOX2P48431 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.74□□□□□ -0.05
SOX2P48431 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SOX2P48431 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.74□□□□□ -0.05
SOX2P48431 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.74□□□□□ -0.05
SOX2P48431 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.74□□□□□ -0.05
SOX2P48431 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.74□□□□□ -0.05
SOX2P48431 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
SOX2P48431 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms