Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A1P43005 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A1P43005 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A1P43005 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC1A1P43005 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A1P43005 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A1P43005 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A1P43005 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A1P43005 LINC02199-201ENST00000506655 2702 ntBASIC17.48■□□□□ 0.39
SLC1A1P43005 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A1P43005 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SLC1A1P43005 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC1A1P43005 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.48■□□□□ 0.39
SLC1A1P43005 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC1A1P43005 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.48■□□□□ 0.39
SLC1A1P43005 MIR1199-201ENST00000621445 119 ntBASIC17.48■□□□□ 0.39
SLC1A1P43005 PGM5P2-202ENST00000637225 1043 ntBASIC17.48■□□□□ 0.39
SLC1A1P43005 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A1P43005 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
SLC1A1P43005 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A1P43005 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SLC1A1P43005 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A1P43005 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A1P43005 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC1A1P43005 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A1P43005 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC1A1P43005 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC1A1P43005 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.48■□□□□ 0.39
SLC1A1P43005 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A1P43005 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SLC1A1P43005 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A1P43005 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A1P43005 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A1P43005 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SLC1A1P43005 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A1P43005 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC1A1P43005 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A1P43005 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC1A1P43005 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A1P43005 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A1P43005 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A1P43005 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A1P43005 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A1P43005 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC1A1P43005 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A1P43005 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A1P43005 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
SLC1A1P43005 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A1P43005 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.47■□□□□ 0.39
SLC1A1P43005 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC1A1P43005 DUSP5P1-201ENST00000441325 1139 ntBASIC17.47■□□□□ 0.39
SLC1A1P43005 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC1A1P43005 RNPS1P1-201ENST00000507437 918 ntBASIC17.47■□□□□ 0.39
SLC1A1P43005 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.47■□□□□ 0.39
SLC1A1P43005 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
SLC1A1P43005 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC1A1P43005 CLEC4GP1-201ENST00000596555 870 ntBASIC17.47■□□□□ 0.39
SLC1A1P43005 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A1P43005 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SLC1A1P43005 AC008735.5-201ENST00000623544 497 ntBASIC17.47■□□□□ 0.39
SLC1A1P43005 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC1A1P43005 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC1A1P43005 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A1P43005 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A1P43005 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
SLC1A1P43005 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC1A1P43005 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
SLC1A1P43005 AC006449.6-201ENST00000612330 2296 ntBASIC17.47■□□□□ 0.39
SLC1A1P43005 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A1P43005 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A1P43005 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A1P43005 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SLC1A1P43005 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A1P43005 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A1P43005 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A1P43005 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
SLC1A1P43005 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SLC1A1P43005 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC1A1P43005 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC1A1P43005 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A1P43005 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC1A1P43005 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A1P43005 AL365203.3-201ENST00000609742 2057 ntBASIC17.46■□□□□ 0.39
SLC1A1P43005 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A1P43005 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A1P43005 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC1A1P43005 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A1P43005 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A1P43005 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC1A1P43005 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A1P43005 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A1P43005 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC1A1P43005 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC1A1P43005 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC1A1P43005 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
SLC1A1P43005 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC1A1P43005 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC1A1P43005 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.46■□□□□ 0.39
SLC1A1P43005 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.46■□□□□ 0.39
SLC1A1P43005 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms