Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
COPB2P35606 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19■□□□□ 0.63
COPB2P35606 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19■□□□□ 0.63
COPB2P35606 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COPB2P35606 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19■□□□□ 0.63
COPB2P35606 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
COPB2P35606 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
COPB2P35606 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
COPB2P35606 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19■□□□□ 0.63
COPB2P35606 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19■□□□□ 0.63
COPB2P35606 AL590560.3-201ENST00000623350 461 ntBASIC19■□□□□ 0.63
COPB2P35606 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19■□□□□ 0.63
COPB2P35606 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COPB2P35606 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19■□□□□ 0.63
COPB2P35606 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19■□□□□ 0.63
COPB2P35606 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COPB2P35606 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COPB2P35606 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
COPB2P35606 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
COPB2P35606 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19■□□□□ 0.63
COPB2P35606 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19■□□□□ 0.63
COPB2P35606 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
COPB2P35606 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
COPB2P35606 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19■□□□□ 0.63
COPB2P35606 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.99■□□□□ 0.63
COPB2P35606 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
COPB2P35606 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COPB2P35606 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COPB2P35606 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COPB2P35606 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COPB2P35606 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COPB2P35606 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COPB2P35606 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.99■□□□□ 0.63
COPB2P35606 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COPB2P35606 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
COPB2P35606 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COPB2P35606 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COPB2P35606 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COPB2P35606 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COPB2P35606 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.99■□□□□ 0.63
COPB2P35606 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.99■□□□□ 0.63
COPB2P35606 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.99■□□□□ 0.63
COPB2P35606 AC098859.1-201ENST00000502915 1238 ntBASIC18.99■□□□□ 0.63
COPB2P35606 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.99■□□□□ 0.63
COPB2P35606 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.99■□□□□ 0.63
COPB2P35606 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.99■□□□□ 0.63
COPB2P35606 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.99■□□□□ 0.63
COPB2P35606 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
COPB2P35606 AC027307.3-201ENST00000594262 1100 ntBASIC18.99■□□□□ 0.63
COPB2P35606 SPTSSB-204ENST00000617024 1292 ntBASIC18.99■□□□□ 0.63
COPB2P35606 SPDYE12P-201ENST00000618416 771 ntBASIC18.99■□□□□ 0.63
COPB2P35606 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COPB2P35606 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COPB2P35606 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COPB2P35606 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COPB2P35606 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.99■□□□□ 0.63
COPB2P35606 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COPB2P35606 AC009053.2-201ENST00000563701 2365 ntBASIC18.99■□□□□ 0.63
COPB2P35606 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COPB2P35606 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.99■□□□□ 0.63
COPB2P35606 AC141586.5-201ENST00000624546 2050 ntBASIC18.99■□□□□ 0.63
COPB2P35606 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COPB2P35606 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.99■□□□□ 0.63
COPB2P35606 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.99■□□□□ 0.63
COPB2P35606 AC063926.2-201ENST00000623766 1308 ntBASIC18.99■□□□□ 0.63
COPB2P35606 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COPB2P35606 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
COPB2P35606 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
COPB2P35606 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COPB2P35606 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.98■□□□□ 0.63
COPB2P35606 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
COPB2P35606 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COPB2P35606 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COPB2P35606 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COPB2P35606 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
COPB2P35606 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COPB2P35606 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.98■□□□□ 0.63
COPB2P35606 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.98■□□□□ 0.63
COPB2P35606 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COPB2P35606 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COPB2P35606 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.98■□□□□ 0.63
COPB2P35606 AP002490.2-201ENST00000524791 560 ntBASIC18.98■□□□□ 0.63
COPB2P35606 AC005225.4-201ENST00000557330 545 ntBASIC18.98■□□□□ 0.63
COPB2P35606 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.98■□□□□ 0.63
COPB2P35606 AC012645.4-201ENST00000610691 1061 ntBASIC18.98■□□□□ 0.63
COPB2P35606 AL358472.5-202ENST00000641448 1267 ntBASIC18.98■□□□□ 0.63
COPB2P35606 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COPB2P35606 FOXO1B-201ENST00000504678 1527 ntBASIC18.98■□□□□ 0.63
COPB2P35606 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.98■□□□□ 0.63
COPB2P35606 KRT8P39-201ENST00000396270 1433 ntBASIC18.98■□□□□ 0.63
COPB2P35606 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.98■□□□□ 0.63
COPB2P35606 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
COPB2P35606 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COPB2P35606 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.98■□□□□ 0.63
COPB2P35606 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COPB2P35606 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COPB2P35606 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COPB2P35606 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
COPB2P35606 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COPB2P35606 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms