Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.03■□□□□ 0.64
CLCN1P35523 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN1P35523 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC19.03■□□□□ 0.64
CLCN1P35523 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN1P35523 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN1P35523 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.03■□□□□ 0.64
CLCN1P35523 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN1P35523 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN1P35523 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN1P35523 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.03■□□□□ 0.64
CLCN1P35523 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.03■□□□□ 0.64
CLCN1P35523 RN7SL606P-201ENST00000472779 293 ntBASIC19.03■□□□□ 0.64
CLCN1P35523 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN1P35523 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.03■□□□□ 0.64
CLCN1P35523 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN1P35523 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CLCN1P35523 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN1P35523 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN1P35523 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC19.03■□□□□ 0.64
CLCN1P35523 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN1P35523 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN1P35523 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN1P35523 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN1P35523 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CLCN1P35523 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCN1P35523 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCN1P35523 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
CLCN1P35523 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CLCN1P35523 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.02■□□□□ 0.64
CLCN1P35523 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCN1P35523 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC19.02■□□□□ 0.64
CLCN1P35523 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCN1P35523 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC19.02■□□□□ 0.64
CLCN1P35523 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CLCN1P35523 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CLCN1P35523 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.02■□□□□ 0.64
CLCN1P35523 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLCN1P35523 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCN1P35523 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLCN1P35523 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCN1P35523 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCN1P35523 TSPY22P-201ENST00000427496 604 ntBASIC19.02■□□□□ 0.64
CLCN1P35523 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CLCN1P35523 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.02■□□□□ 0.64
CLCN1P35523 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.02■□□□□ 0.64
CLCN1P35523 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.02■□□□□ 0.64
CLCN1P35523 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.02■□□□□ 0.64
CLCN1P35523 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
CLCN1P35523 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.02■□□□□ 0.64
CLCN1P35523 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.02■□□□□ 0.64
CLCN1P35523 AL589935.2-201ENST00000616471 1231 ntBASIC19.02■□□□□ 0.64
CLCN1P35523 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CLCN1P35523 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CLCN1P35523 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CLCN1P35523 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCN1P35523 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCN1P35523 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CLCN1P35523 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLCN1P35523 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CLCN1P35523 AC006486.2-201ENST00000624246 2199 ntBASIC19.02■□□□□ 0.63
CLCN1P35523 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLCN1P35523 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLCN1P35523 AC007191.1-201ENST00000623179 2995 ntBASIC19.02■□□□□ 0.63
CLCN1P35523 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CLCN1P35523 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CLCN1P35523 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCN1P35523 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.01■□□□□ 0.63
CLCN1P35523 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCN1P35523 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCN1P35523 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CLCN1P35523 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CLCN1P35523 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCN1P35523 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCN1P35523 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CLCN1P35523 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CLCN1P35523 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCN1P35523 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.01■□□□□ 0.63
CLCN1P35523 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCN1P35523 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLCN1P35523 FAM86EP-206ENST00000510506 987 ntBASIC19.01■□□□□ 0.63
CLCN1P35523 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.01■□□□□ 0.63
CLCN1P35523 AC011498.5-201ENST00000592027 486 ntBASIC19.01■□□□□ 0.63
CLCN1P35523 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.01■□□□□ 0.63
CLCN1P35523 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CLCN1P35523 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCN1P35523 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.01■□□□□ 0.63
CLCN1P35523 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCN1P35523 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC19.01■□□□□ 0.63
CLCN1P35523 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCN1P35523 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCN1P35523 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLCN1P35523 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCN1P35523 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLCN1P35523 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC19.01■□□□□ 0.63
CLCN1P35523 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLCN1P35523 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLCN1P35523 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CLCN1P35523 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CLCN1P35523 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLCN1P35523 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms