Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.18■□□□□ 0.5
RFX1P22670 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.18■□□□□ 0.5
RFX1P22670 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.18■□□□□ 0.5
RFX1P22670 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.18■□□□□ 0.5
RFX1P22670 AL513190.1-201ENST00000621254 727 ntBASIC18.18■□□□□ 0.5
RFX1P22670 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.18■□□□□ 0.5
RFX1P22670 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.18■□□□□ 0.5
RFX1P22670 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RFX1P22670 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX1P22670 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFX1P22670 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX1P22670 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.18■□□□□ 0.5
RFX1P22670 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX1P22670 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFX1P22670 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RFX1P22670 PI4KAP1-204ENST00000612579 1703 ntBASIC18.18■□□□□ 0.5
RFX1P22670 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX1P22670 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX1P22670 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX1P22670 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX1P22670 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX1P22670 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX1P22670 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX1P22670 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX1P22670 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX1P22670 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RFX1P22670 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.17■□□□□ 0.5
RFX1P22670 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.17■□□□□ 0.5
RFX1P22670 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RFX1P22670 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RFX1P22670 AC018845.2-201ENST00000568326 409 ntBASIC18.17■□□□□ 0.5
RFX1P22670 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.17■□□□□ 0.5
RFX1P22670 MPDU1-223ENST00000582151 728 ntBASIC18.17■□□□□ 0.5
RFX1P22670 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.17■□□□□ 0.5
RFX1P22670 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX1P22670 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.17■□□□□ 0.5
RFX1P22670 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX1P22670 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.17■□□□□ 0.5
RFX1P22670 GGTLC5P-201ENST00000617623 998 ntBASIC18.17■□□□□ 0.5
RFX1P22670 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RFX1P22670 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.17■□□□□ 0.5
RFX1P22670 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX1P22670 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX1P22670 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX1P22670 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.17■□□□□ 0.5
RFX1P22670 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX1P22670 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.17■□□□□ 0.5
RFX1P22670 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
RFX1P22670 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.17■□□□□ 0.5
RFX1P22670 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX1P22670 PCDHB19P-201ENST00000570871 2371 ntBASIC18.17■□□□□ 0.5
RFX1P22670 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX1P22670 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX1P22670 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.17■□□□□ 0.5
RFX1P22670 AC006504.4-201ENST00000592118 1568 ntBASIC18.17■□□□□ 0.5
RFX1P22670 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
RFX1P22670 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX1P22670 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RFX1P22670 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX1P22670 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFX1P22670 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFX1P22670 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RFX1P22670 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX1P22670 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RFX1P22670 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX1P22670 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.16■□□□□ 0.5
RFX1P22670 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RFX1P22670 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX1P22670 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.16■□□□□ 0.5
RFX1P22670 AC092474.2-201ENST00000424288 719 ntBASIC18.16■□□□□ 0.5
RFX1P22670 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RFX1P22670 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.16■□□□□ 0.5
RFX1P22670 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.16■□□□□ 0.5
RFX1P22670 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.16■□□□□ 0.5
RFX1P22670 AC092171.3-201ENST00000610122 2651 ntBASIC18.16■□□□□ 0.5
RFX1P22670 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.16■□□□□ 0.5
RFX1P22670 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.16■□□□□ 0.5
RFX1P22670 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RFX1P22670 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX1P22670 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
RFX1P22670 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.16■□□□□ 0.5
RFX1P22670 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX1P22670 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFX1P22670 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFX1P22670 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX1P22670 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX1P22670 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX1P22670 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX1P22670 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFX1P22670 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RFX1P22670 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX1P22670 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.15■□□□□ 0.5
RFX1P22670 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.15■□□□□ 0.5
RFX1P22670 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX1P22670 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
RFX1P22670 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFX1P22670 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX1P22670 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.15■□□□□ 0.5
RFX1P22670 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.15■□□□□ 0.5
RFX1P22670 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms