Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
LMNB1P20700 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
LMNB1P20700 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LMNB1P20700 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
LMNB1P20700 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
LMNB1P20700 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
LMNB1P20700 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LMNB1P20700 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC20.05■□□□□ 0.8
LMNB1P20700 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LMNB1P20700 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.05■□□□□ 0.8
LMNB1P20700 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LMNB1P20700 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LMNB1P20700 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC20.05■□□□□ 0.8
LMNB1P20700 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LMNB1P20700 AC138028.4-201ENST00000564984 1845 ntBASIC20.05■□□□□ 0.8
LMNB1P20700 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LMNB1P20700 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LMNB1P20700 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
LMNB1P20700 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
LMNB1P20700 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LMNB1P20700 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LMNB1P20700 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LMNB1P20700 SPDYE17-201ENST00000412399 783 ntBASIC20.05■□□□□ 0.8
LMNB1P20700 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.05■□□□□ 0.8
LMNB1P20700 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.05■□□□□ 0.8
LMNB1P20700 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
LMNB1P20700 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC20.05■□□□□ 0.8
LMNB1P20700 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.05■□□□□ 0.8
LMNB1P20700 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.05■□□□□ 0.8
LMNB1P20700 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
LMNB1P20700 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC20.05■□□□□ 0.8
LMNB1P20700 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.05■□□□□ 0.8
LMNB1P20700 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LMNB1P20700 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LMNB1P20700 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.05■□□□□ 0.8
LMNB1P20700 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LMNB1P20700 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.05■□□□□ 0.8
LMNB1P20700 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LMNB1P20700 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.05■□□□□ 0.8
LMNB1P20700 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LMNB1P20700 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LMNB1P20700 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.05■□□□□ 0.8
LMNB1P20700 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
LMNB1P20700 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LMNB1P20700 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LMNB1P20700 HCG11-201ENST00000411553 5696 ntBASIC20.05■□□□□ 0.8
LMNB1P20700 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
LMNB1P20700 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
LMNB1P20700 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.04■□□□□ 0.8
LMNB1P20700 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
LMNB1P20700 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.04■□□□□ 0.8
LMNB1P20700 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LMNB1P20700 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.04■□□□□ 0.8
LMNB1P20700 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LMNB1P20700 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LMNB1P20700 KLF2P4-201ENST00000451959 1225 ntBASIC20.04■□□□□ 0.8
LMNB1P20700 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.04■□□□□ 0.8
LMNB1P20700 AC233724.13-201ENST00000598383 410 ntBASIC20.04■□□□□ 0.8
LMNB1P20700 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.04■□□□□ 0.8
LMNB1P20700 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.04■□□□□ 0.8
LMNB1P20700 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LMNB1P20700 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC20.04■□□□□ 0.8
LMNB1P20700 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.04■□□□□ 0.8
LMNB1P20700 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LMNB1P20700 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LMNB1P20700 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LMNB1P20700 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.04■□□□□ 0.8
LMNB1P20700 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LMNB1P20700 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LMNB1P20700 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LMNB1P20700 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LMNB1P20700 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LMNB1P20700 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.03■□□□□ 0.8
LMNB1P20700 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
LMNB1P20700 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.03■□□□□ 0.8
LMNB1P20700 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LMNB1P20700 NOC2LP1-202ENST00000452600 2235 ntBASIC20.03■□□□□ 0.8
LMNB1P20700 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
LMNB1P20700 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LMNB1P20700 PDIA3P1-201ENST00000471856 1510 ntBASIC20.03■□□□□ 0.8
LMNB1P20700 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.03■□□□□ 0.8
LMNB1P20700 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.03■□□□□ 0.8
LMNB1P20700 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LMNB1P20700 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
LMNB1P20700 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LMNB1P20700 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC20.03■□□□□ 0.8
LMNB1P20700 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LMNB1P20700 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LMNB1P20700 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.03■□□□□ 0.8
LMNB1P20700 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC20.03■□□□□ 0.8
LMNB1P20700 AC099548.2-209ENST00000480264 625 ntBASIC20.03■□□□□ 0.8
LMNB1P20700 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
LMNB1P20700 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LMNB1P20700 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC20.03■□□□□ 0.8
LMNB1P20700 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LMNB1P20700 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LMNB1P20700 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.03■□□□□ 0.8
LMNB1P20700 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LMNB1P20700 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LMNB1P20700 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms