Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 CLK3P2-201ENST00000427566 1453 ntBASIC28.67■■■□□ 2.18
TOP2AP11388 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC28.67■■■□□ 2.18
TOP2AP11388 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
TOP2AP11388 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC28.67■■■□□ 2.18
TOP2AP11388 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC28.67■■■□□ 2.18
TOP2AP11388 AP005482.1-201ENST00000563722 1273 ntBASIC28.67■■■□□ 2.18
TOP2AP11388 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC28.67■■■□□ 2.18
TOP2AP11388 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TOP2AP11388 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC28.67■■■□□ 2.18
TOP2AP11388 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TOP2AP11388 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TOP2AP11388 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC28.67■■■□□ 2.18
TOP2AP11388 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TOP2AP11388 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TOP2AP11388 NEFHP1-201ENST00000412845 2629 ntBASIC28.67■■■□□ 2.18
TOP2AP11388 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
TOP2AP11388 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
TOP2AP11388 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC28.66■■■□□ 2.18
TOP2AP11388 CROCCP4-201ENST00000457096 498 ntBASIC28.66■■■□□ 2.18
TOP2AP11388 PAM16-204ENST00000571941 674 ntTSL 3 BASIC28.66■■■□□ 2.18
TOP2AP11388 MIR5189-201ENST00000577370 114 ntBASIC28.66■■■□□ 2.18
TOP2AP11388 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC28.66■■■□□ 2.18
TOP2AP11388 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
TOP2AP11388 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
TOP2AP11388 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
TOP2AP11388 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
TOP2AP11388 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC28.66■■■□□ 2.18
TOP2AP11388 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC28.66■■■□□ 2.18
TOP2AP11388 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
TOP2AP11388 PCGF3-213ENST00000620529 1899 ntBASIC28.65■■■□□ 2.18
TOP2AP11388 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
TOP2AP11388 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC28.65■■■□□ 2.18
TOP2AP11388 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC28.65■■■□□ 2.18
TOP2AP11388 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC28.65■■■□□ 2.18
TOP2AP11388 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC28.65■■■□□ 2.18
TOP2AP11388 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC28.65■■■□□ 2.18
TOP2AP11388 MIR6799-201ENST00000620297 69 ntBASIC28.65■■■□□ 2.18
TOP2AP11388 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC28.65■■■□□ 2.18
TOP2AP11388 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
TOP2AP11388 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
TOP2AP11388 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
TOP2AP11388 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
TOP2AP11388 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC28.65■■■□□ 2.18
TOP2AP11388 CDC14C-201ENST00000428251 1719 ntBASIC28.65■■■□□ 2.18
TOP2AP11388 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC28.65■■■□□ 2.18
TOP2AP11388 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
TOP2AP11388 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC28.65■■■□□ 2.18
TOP2AP11388 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
TOP2AP11388 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
TOP2AP11388 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
TOP2AP11388 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
TOP2AP11388 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
TOP2AP11388 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC28.64■■■□□ 2.18
TOP2AP11388 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
TOP2AP11388 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC28.64■■■□□ 2.18
TOP2AP11388 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC28.64■■■□□ 2.18
TOP2AP11388 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC28.64■■■□□ 2.18
TOP2AP11388 MIR6775-201ENST00000617557 69 ntBASIC28.64■■■□□ 2.18
TOP2AP11388 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.18
TOP2AP11388 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
TOP2AP11388 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
TOP2AP11388 AL603756.1-201ENST00000606511 2163 ntBASIC28.64■■■□□ 2.18
TOP2AP11388 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
TOP2AP11388 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
TOP2AP11388 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC28.64■■■□□ 2.18
TOP2AP11388 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
TOP2AP11388 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC28.64■■■□□ 2.18
TOP2AP11388 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
TOP2AP11388 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
TOP2AP11388 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC28.64■■■□□ 2.17
TOP2AP11388 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.17
TOP2AP11388 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC28.64■■■□□ 2.17
TOP2AP11388 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC28.64■■■□□ 2.17
TOP2AP11388 AL365330.1-201ENST00000607459 531 ntBASIC28.64■■■□□ 2.17
TOP2AP11388 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
TOP2AP11388 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
TOP2AP11388 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TOP2AP11388 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
TOP2AP11388 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
TOP2AP11388 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
TOP2AP11388 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
TOP2AP11388 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
TOP2AP11388 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
TOP2AP11388 AZGP1P1-201ENST00000411909 902 ntBASIC28.63■■■□□ 2.17
TOP2AP11388 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC28.63■■■□□ 2.17
TOP2AP11388 BNIP3P42-201ENST00000454982 569 ntBASIC28.63■■■□□ 2.17
TOP2AP11388 MIR4525-201ENST00000580000 75 ntBASIC28.63■■■□□ 2.17
TOP2AP11388 BNIP3P29-201ENST00000598302 571 ntBASIC28.63■■■□□ 2.17
TOP2AP11388 AC011447.5-201ENST00000616168 564 ntBASIC28.63■■■□□ 2.17
TOP2AP11388 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC28.63■■■□□ 2.17
TOP2AP11388 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
TOP2AP11388 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
TOP2AP11388 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC28.63■■■□□ 2.17
TOP2AP11388 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
TOP2AP11388 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC28.62■■■□□ 2.17
TOP2AP11388 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC28.62■■■□□ 2.17
TOP2AP11388 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC28.62■■■□□ 2.17
TOP2AP11388 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
TOP2AP11388 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC28.62■■■□□ 2.17
TOP2AP11388 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC28.62■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms