Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CHRNB1P11230 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNB1P11230 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNB1P11230 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CHRNB1P11230 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNB1P11230 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNB1P11230 AL021920.2-201ENST00000624828 1351 ntBASIC16.86■□□□□ 0.29
CHRNB1P11230 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNB1P11230 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNB1P11230 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNB1P11230 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNB1P11230 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNB1P11230 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
CHRNB1P11230 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNB1P11230 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNB1P11230 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNB1P11230 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.85■□□□□ 0.29
CHRNB1P11230 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CHRNB1P11230 CETN4P-206ENST00000642099 2168 ntBASIC16.85■□□□□ 0.29
CHRNB1P11230 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CHRNB1P11230 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNB1P11230 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNB1P11230 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CHRNB1P11230 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNB1P11230 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNB1P11230 AC067852.2-201ENST00000590513 2313 ntBASIC16.85■□□□□ 0.29
CHRNB1P11230 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNB1P11230 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CHRNB1P11230 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNB1P11230 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.85■□□□□ 0.29
CHRNB1P11230 FAM220BP-201ENST00000377689 816 ntBASIC16.85■□□□□ 0.29
CHRNB1P11230 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNB1P11230 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CHRNB1P11230 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CHRNB1P11230 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNB1P11230 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.85■□□□□ 0.29
CHRNB1P11230 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.85■□□□□ 0.29
CHRNB1P11230 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNB1P11230 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.85■□□□□ 0.29
CHRNB1P11230 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNB1P11230 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNB1P11230 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNB1P11230 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.85■□□□□ 0.29
CHRNB1P11230 RN7SL828P-201ENST00000607615 303 ntBASIC16.85■□□□□ 0.29
CHRNB1P11230 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.85■□□□□ 0.29
CHRNB1P11230 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CHRNB1P11230 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNB1P11230 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNB1P11230 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CHRNB1P11230 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CHRNB1P11230 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.85■□□□□ 0.29
CHRNB1P11230 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.85■□□□□ 0.29
CHRNB1P11230 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.85■□□□□ 0.29
CHRNB1P11230 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CHRNB1P11230 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNB1P11230 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNB1P11230 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNB1P11230 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNB1P11230 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
CHRNB1P11230 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNB1P11230 FRMD8P1-201ENST00000440433 1524 ntBASIC16.85■□□□□ 0.29
CHRNB1P11230 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CHRNB1P11230 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNB1P11230 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNB1P11230 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNB1P11230 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNB1P11230 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.84■□□□□ 0.29
CHRNB1P11230 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNB1P11230 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNB1P11230 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CHRNB1P11230 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CHRNB1P11230 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNB1P11230 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNB1P11230 MTND6P24-201ENST00000440466 518 ntBASIC16.84■□□□□ 0.29
CHRNB1P11230 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNB1P11230 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNB1P11230 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.84■□□□□ 0.29
CHRNB1P11230 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.84■□□□□ 0.29
CHRNB1P11230 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CHRNB1P11230 AL589739.1-201ENST00000607720 493 ntBASIC16.84■□□□□ 0.29
CHRNB1P11230 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNB1P11230 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNB1P11230 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.84■□□□□ 0.29
CHRNB1P11230 AC004840.1-201ENST00000636359 365 ntBASIC16.84■□□□□ 0.29
CHRNB1P11230 AC084018.2-201ENST00000613093 2607 ntBASIC16.84■□□□□ 0.29
CHRNB1P11230 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNB1P11230 AC016396.2-201ENST00000562575 1417 ntBASIC16.84■□□□□ 0.29
CHRNB1P11230 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CHRNB1P11230 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNB1P11230 AC138969.3-201ENST00000546612 1459 ntBASIC16.84■□□□□ 0.29
CHRNB1P11230 AC138932.2-201ENST00000548268 1459 ntBASIC16.84■□□□□ 0.29
CHRNB1P11230 AC126755.4-201ENST00000549796 1459 ntBASIC16.84■□□□□ 0.29
CHRNB1P11230 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CHRNB1P11230 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CHRNB1P11230 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CHRNB1P11230 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNB1P11230 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNB1P11230 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNB1P11230 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNB1P11230 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms