Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.82■□□□□ 0.28
RETP07949 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.82■□□□□ 0.28
RETP07949 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
RETP07949 AL009183.1-201ENST00000603760 355 ntBASIC16.82■□□□□ 0.28
RETP07949 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RETP07949 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RETP07949 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RETP07949 AL590560.3-201ENST00000623350 461 ntBASIC16.82■□□□□ 0.28
RETP07949 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.82■□□□□ 0.28
RETP07949 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.82■□□□□ 0.28
RETP07949 AC106820.2-201ENST00000563775 3264 ntBASIC16.82■□□□□ 0.28
RETP07949 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RETP07949 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RETP07949 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RETP07949 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RETP07949 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.82■□□□□ 0.28
RETP07949 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RETP07949 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.82■□□□□ 0.28
RETP07949 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.82■□□□□ 0.28
RETP07949 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
RETP07949 AC022144.1-201ENST00000602255 1580 ntBASIC16.81■□□□□ 0.28
RETP07949 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RETP07949 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RETP07949 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RETP07949 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RETP07949 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RETP07949 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RETP07949 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RETP07949 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.81■□□□□ 0.28
RETP07949 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RETP07949 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RETP07949 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RETP07949 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.81■□□□□ 0.28
RETP07949 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.81■□□□□ 0.28
RETP07949 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RETP07949 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RETP07949 HMGA1P7-201ENST00000406908 502 ntBASIC16.81■□□□□ 0.28
RETP07949 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RETP07949 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.81■□□□□ 0.28
RETP07949 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.81■□□□□ 0.28
RETP07949 SPTLC1P1-201ENST00000447199 261 ntBASIC16.81■□□□□ 0.28
RETP07949 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RETP07949 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.81■□□□□ 0.28
RETP07949 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
RETP07949 MIR4453-201ENST00000584019 89 ntBASIC16.81■□□□□ 0.28
RETP07949 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.81■□□□□ 0.28
RETP07949 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.81■□□□□ 0.28
RETP07949 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.81■□□□□ 0.28
RETP07949 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RETP07949 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.81■□□□□ 0.28
RETP07949 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RETP07949 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RETP07949 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.81■□□□□ 0.28
RETP07949 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RETP07949 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RETP07949 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
RETP07949 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RETP07949 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RETP07949 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RETP07949 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RETP07949 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RETP07949 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RETP07949 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RETP07949 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RETP07949 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RETP07949 AC245100.3-201ENST00000441281 285 ntBASIC16.8■□□□□ 0.28
RETP07949 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.8■□□□□ 0.28
RETP07949 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.8■□□□□ 0.28
RETP07949 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.8■□□□□ 0.28
RETP07949 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.8■□□□□ 0.28
RETP07949 AC008267.7-201ENST00000624570 1194 ntBASIC16.8■□□□□ 0.28
RETP07949 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RETP07949 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.8■□□□□ 0.28
RETP07949 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.8■□□□□ 0.28
RETP07949 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.8■□□□□ 0.28
RETP07949 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RETP07949 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RETP07949 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RETP07949 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RETP07949 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RETP07949 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RETP07949 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.8■□□□□ 0.28
RETP07949 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RETP07949 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RETP07949 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RETP07949 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RETP07949 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.79■□□□□ 0.28
RETP07949 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RETP07949 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.79■□□□□ 0.28
RETP07949 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.79■□□□□ 0.28
RETP07949 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RETP07949 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RETP07949 AL135999.2-201ENST00000622438 1686 ntBASIC16.79■□□□□ 0.28
RETP07949 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RETP07949 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.79■□□□□ 0.28
RETP07949 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RETP07949 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RETP07949 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RETP07949 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
RETP07949 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms