Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD74P04233 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD74P04233 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.07□□□□□ -0.16
CD74P04233 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.07□□□□□ -0.16
CD74P04233 AC023157.3-201ENST00000619086 2088 ntBASIC14.06□□□□□ -0.16
CD74P04233 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.06□□□□□ -0.16
CD74P04233 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CD74P04233 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.06□□□□□ -0.16
CD74P04233 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.06□□□□□ -0.16
CD74P04233 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.06□□□□□ -0.16
CD74P04233 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD74P04233 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CD74P04233 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD74P04233 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.06□□□□□ -0.16
CD74P04233 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.06□□□□□ -0.16
CD74P04233 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CD74P04233 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD74P04233 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD74P04233 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD74P04233 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD74P04233 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.06□□□□□ -0.16
CD74P04233 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD74P04233 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD74P04233 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.06□□□□□ -0.16
CD74P04233 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD74P04233 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD74P04233 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CD74P04233 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CD74P04233 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD74P04233 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.06□□□□□ -0.16
CD74P04233 SIGLEC30P-201ENST00000455569 941 ntBASIC14.06□□□□□ -0.16
CD74P04233 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.06□□□□□ -0.16
CD74P04233 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.06□□□□□ -0.16
CD74P04233 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CD74P04233 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.06□□□□□ -0.16
CD74P04233 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.06□□□□□ -0.16
CD74P04233 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.06□□□□□ -0.16
CD74P04233 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.06□□□□□ -0.16
CD74P04233 AC011467.2-201ENST00000598425 242 ntBASIC14.06□□□□□ -0.16
CD74P04233 HYMAI.1-201ENST00000620949 238 ntBASIC14.06□□□□□ -0.16
CD74P04233 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CD74P04233 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CD74P04233 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD74P04233 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD74P04233 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.06□□□□□ -0.16
CD74P04233 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD74P04233 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD74P04233 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CD74P04233 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD74P04233 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD74P04233 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD74P04233 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.06□□□□□ -0.16
CD74P04233 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD74P04233 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.06□□□□□ -0.16
CD74P04233 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD74P04233 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.06□□□□□ -0.16
CD74P04233 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD74P04233 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD74P04233 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD74P04233 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.05□□□□□ -0.16
CD74P04233 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD74P04233 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CD74P04233 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD74P04233 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD74P04233 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD74P04233 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD74P04233 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CD74P04233 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD74P04233 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD74P04233 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CD74P04233 LINC01144-201ENST00000626198 1710 ntBASIC14.05□□□□□ -0.16
CD74P04233 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD74P04233 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.05□□□□□ -0.16
CD74P04233 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.05□□□□□ -0.16
CD74P04233 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD74P04233 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CD74P04233 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD74P04233 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD74P04233 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD74P04233 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD74P04233 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.05□□□□□ -0.16
CD74P04233 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD74P04233 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.05□□□□□ -0.16
CD74P04233 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.05□□□□□ -0.16
CD74P04233 AC011840.4-201ENST00000578471 627 ntBASIC14.05□□□□□ -0.16
CD74P04233 TERC-201ENST00000602385 541 ntBASIC14.05□□□□□ -0.16
CD74P04233 AC124864.1-201ENST00000623408 392 ntBASIC14.05□□□□□ -0.16
CD74P04233 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD74P04233 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.05□□□□□ -0.16
CD74P04233 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.05□□□□□ -0.16
CD74P04233 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.05□□□□□ -0.16
CD74P04233 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CD74P04233 KRT8P39-201ENST00000396270 1433 ntBASIC14.05□□□□□ -0.16
CD74P04233 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD74P04233 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD74P04233 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD74P04233 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CD74P04233 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CD74P04233 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.05□□□□□ -0.16
CD74P04233 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms