Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT6AP02538 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT6AP02538 AKR1C7P-201ENST00000305623 895 ntBASIC16.22■□□□□ 0.19
KRT6AP02538 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT6AP02538 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
KRT6AP02538 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.22■□□□□ 0.19
KRT6AP02538 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.22■□□□□ 0.19
KRT6AP02538 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT6AP02538 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT6AP02538 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT6AP02538 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.22■□□□□ 0.19
KRT6AP02538 AC025062.2-201ENST00000605477 670 ntBASIC16.22■□□□□ 0.19
KRT6AP02538 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT6AP02538 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT6AP02538 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
KRT6AP02538 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT6AP02538 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
KRT6AP02538 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT6AP02538 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT6AP02538 ME2P1-201ENST00000426028 1970 ntBASIC16.22■□□□□ 0.19
KRT6AP02538 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT6AP02538 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
KRT6AP02538 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT6AP02538 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT6AP02538 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT6AP02538 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT6AP02538 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.21■□□□□ 0.19
KRT6AP02538 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
KRT6AP02538 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT6AP02538 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT6AP02538 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT6AP02538 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT6AP02538 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT6AP02538 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT6AP02538 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT6AP02538 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT6AP02538 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT6AP02538 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.21■□□□□ 0.19
KRT6AP02538 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT6AP02538 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.21■□□□□ 0.19
KRT6AP02538 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT6AP02538 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT6AP02538 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT6AP02538 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
KRT6AP02538 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT6AP02538 ELK2BP-201ENST00000415014 1224 ntBASIC16.21■□□□□ 0.19
KRT6AP02538 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
KRT6AP02538 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
KRT6AP02538 AF238378.1-201ENST00000526806 358 ntBASIC16.21■□□□□ 0.19
KRT6AP02538 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.21■□□□□ 0.19
KRT6AP02538 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
KRT6AP02538 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
KRT6AP02538 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT6AP02538 REXO1L3P-201ENST00000622202 1288 ntBASIC16.21■□□□□ 0.19
KRT6AP02538 AC107918.4-202ENST00000641623 219 ntBASIC16.21■□□□□ 0.19
KRT6AP02538 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
KRT6AP02538 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT6AP02538 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT6AP02538 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT6AP02538 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
KRT6AP02538 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT6AP02538 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
KRT6AP02538 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT6AP02538 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT6AP02538 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT6AP02538 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.21■□□□□ 0.18
KRT6AP02538 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
KRT6AP02538 AC006504.4-201ENST00000592118 1568 ntBASIC16.21■□□□□ 0.18
KRT6AP02538 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.21■□□□□ 0.18
KRT6AP02538 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.21■□□□□ 0.18
KRT6AP02538 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.21■□□□□ 0.18
KRT6AP02538 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
KRT6AP02538 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
KRT6AP02538 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.2■□□□□ 0.18
KRT6AP02538 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.2■□□□□ 0.18
KRT6AP02538 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT6AP02538 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT6AP02538 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.2■□□□□ 0.18
KRT6AP02538 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT6AP02538 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT6AP02538 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT6AP02538 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
KRT6AP02538 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT6AP02538 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT6AP02538 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
KRT6AP02538 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT6AP02538 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.2■□□□□ 0.18
KRT6AP02538 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT6AP02538 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT6AP02538 MIR4492-201ENST00000581627 80 ntBASIC16.2■□□□□ 0.18
KRT6AP02538 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT6AP02538 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT6AP02538 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.2■□□□□ 0.18
KRT6AP02538 GGTLC5P-201ENST00000617623 998 ntBASIC16.2■□□□□ 0.18
KRT6AP02538 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.2■□□□□ 0.18
KRT6AP02538 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.2■□□□□ 0.18
KRT6AP02538 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT6AP02538 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT6AP02538 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT6AP02538 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms