Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CPNE6O95741 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.41■□□□□ 0.22
CPNE6O95741 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.41■□□□□ 0.22
CPNE6O95741 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.41■□□□□ 0.22
CPNE6O95741 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.41■□□□□ 0.22
CPNE6O95741 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CPNE6O95741 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.41■□□□□ 0.22
CPNE6O95741 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.41■□□□□ 0.22
CPNE6O95741 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.41■□□□□ 0.22
CPNE6O95741 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.41■□□□□ 0.22
CPNE6O95741 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE6O95741 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.41■□□□□ 0.22
CPNE6O95741 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.41■□□□□ 0.22
CPNE6O95741 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE6O95741 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE6O95741 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.41■□□□□ 0.22
CPNE6O95741 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE6O95741 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE6O95741 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.41■□□□□ 0.22
CPNE6O95741 PCDHB17P-201ENST00000539533 2393 ntBASIC16.41■□□□□ 0.22
CPNE6O95741 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.41■□□□□ 0.22
CPNE6O95741 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE6O95741 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE6O95741 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE6O95741 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CPNE6O95741 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE6O95741 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.4■□□□□ 0.22
CPNE6O95741 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.4■□□□□ 0.22
CPNE6O95741 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE6O95741 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE6O95741 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE6O95741 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.4■□□□□ 0.22
CPNE6O95741 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE6O95741 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE6O95741 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE6O95741 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.4■□□□□ 0.22
CPNE6O95741 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE6O95741 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.4■□□□□ 0.22
CPNE6O95741 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE6O95741 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.4■□□□□ 0.22
CPNE6O95741 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CPNE6O95741 AC107918.2-201ENST00000530817 355 ntBASIC16.4■□□□□ 0.22
CPNE6O95741 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.4■□□□□ 0.22
CPNE6O95741 AC022145.2-201ENST00000598203 171 ntBASIC16.4■□□□□ 0.22
CPNE6O95741 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.4■□□□□ 0.22
CPNE6O95741 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE6O95741 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.4■□□□□ 0.22
CPNE6O95741 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE6O95741 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE6O95741 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE6O95741 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE6O95741 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE6O95741 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE6O95741 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.4■□□□□ 0.22
CPNE6O95741 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.4■□□□□ 0.22
CPNE6O95741 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CPNE6O95741 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
CPNE6O95741 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE6O95741 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.4■□□□□ 0.22
CPNE6O95741 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.4■□□□□ 0.22
CPNE6O95741 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CPNE6O95741 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
CPNE6O95741 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CPNE6O95741 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CPNE6O95741 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CPNE6O95741 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE6O95741 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
CPNE6O95741 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CPNE6O95741 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE6O95741 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CPNE6O95741 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CPNE6O95741 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE6O95741 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CPNE6O95741 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE6O95741 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE6O95741 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE6O95741 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE6O95741 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CPNE6O95741 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.39■□□□□ 0.21
CPNE6O95741 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE6O95741 AC140658.5-201ENST00000438532 169 ntBASIC16.39■□□□□ 0.21
CPNE6O95741 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.39■□□□□ 0.21
CPNE6O95741 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CPNE6O95741 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.39■□□□□ 0.21
CPNE6O95741 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
CPNE6O95741 FAM86C2P-203ENST00000528684 1004 ntBASIC16.39■□□□□ 0.21
CPNE6O95741 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE6O95741 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.39■□□□□ 0.21
CPNE6O95741 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.39■□□□□ 0.21
CPNE6O95741 AC004449.1-201ENST00000564240 433 ntBASIC16.39■□□□□ 0.21
CPNE6O95741 AC106028.4-201ENST00000614509 607 ntBASIC16.39■□□□□ 0.21
CPNE6O95741 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.39■□□□□ 0.21
CPNE6O95741 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CPNE6O95741 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE6O95741 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE6O95741 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CPNE6O95741 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE6O95741 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.39■□□□□ 0.21
CPNE6O95741 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CPNE6O95741 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms