Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NKX2-2O95096 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.38■□□□□ 0.05
NKX2-2O95096 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.38■□□□□ 0.05
NKX2-2O95096 AC140658.5-201ENST00000438532 169 ntBASIC15.38■□□□□ 0.05
NKX2-2O95096 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 POU5F1P6-201ENST00000466990 990 ntBASIC15.38■□□□□ 0.05
NKX2-2O95096 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.38■□□□□ 0.05
NKX2-2O95096 RNA5SP416-201ENST00000516838 111 ntBASIC15.38■□□□□ 0.05
NKX2-2O95096 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.38■□□□□ 0.05
NKX2-2O95096 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NKX2-2O95096 AL009183.1-201ENST00000603760 355 ntBASIC15.38■□□□□ 0.05
NKX2-2O95096 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.38■□□□□ 0.05
NKX2-2O95096 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.38■□□□□ 0.05
NKX2-2O95096 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.38■□□□□ 0.05
NKX2-2O95096 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NKX2-2O95096 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.38■□□□□ 0.05
NKX2-2O95096 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NKX2-2O95096 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.38■□□□□ 0.05
NKX2-2O95096 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.38■□□□□ 0.05
NKX2-2O95096 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.38■□□□□ 0.05
NKX2-2O95096 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
NKX2-2O95096 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
NKX2-2O95096 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NKX2-2O95096 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
NKX2-2O95096 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NKX2-2O95096 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
NKX2-2O95096 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NKX2-2O95096 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
NKX2-2O95096 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
NKX2-2O95096 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
NKX2-2O95096 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
NKX2-2O95096 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
NKX2-2O95096 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NKX2-2O95096 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NKX2-2O95096 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
NKX2-2O95096 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NKX2-2O95096 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
NKX2-2O95096 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.37■□□□□ 0.05
NKX2-2O95096 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.37■□□□□ 0.05
NKX2-2O95096 MED15P5-201ENST00000423150 992 ntBASIC15.37■□□□□ 0.05
NKX2-2O95096 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NKX2-2O95096 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
NKX2-2O95096 KRT18P3-201ENST00000451602 1288 ntBASIC15.37■□□□□ 0.05
NKX2-2O95096 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.37■□□□□ 0.05
NKX2-2O95096 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NKX2-2O95096 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
NKX2-2O95096 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.37■□□□□ 0.05
NKX2-2O95096 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.37■□□□□ 0.05
NKX2-2O95096 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
NKX2-2O95096 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.37■□□□□ 0.05
NKX2-2O95096 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NKX2-2O95096 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
NKX2-2O95096 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NKX2-2O95096 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NKX2-2O95096 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.37■□□□□ 0.05
NKX2-2O95096 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
NKX2-2O95096 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NKX2-2O95096 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NKX2-2O95096 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.36■□□□□ 0.05
NKX2-2O95096 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX2-2O95096 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX2-2O95096 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NKX2-2O95096 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NKX2-2O95096 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.36■□□□□ 0.05
NKX2-2O95096 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX2-2O95096 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX2-2O95096 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.36■□□□□ 0.05
NKX2-2O95096 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX2-2O95096 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX2-2O95096 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX2-2O95096 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX2-2O95096 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.36■□□□□ 0.05
NKX2-2O95096 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX2-2O95096 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.36■□□□□ 0.05
NKX2-2O95096 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.36■□□□□ 0.05
NKX2-2O95096 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.36■□□□□ 0.05
NKX2-2O95096 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.36■□□□□ 0.05
NKX2-2O95096 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NKX2-2O95096 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
NKX2-2O95096 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.36■□□□□ 0.05
NKX2-2O95096 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.36■□□□□ 0.05
NKX2-2O95096 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.36■□□□□ 0.05
NKX2-2O95096 PDPK2P-202ENST00000562415 1191 ntBASIC15.36■□□□□ 0.05
NKX2-2O95096 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.36■□□□□ 0.05
NKX2-2O95096 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms