Protein–RNA interactions for Protein: O75678

RFPL2, Ret finger protein-like 2, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL2O75678 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.38■□□□□ 0.37
RFPL2O75678 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.38■□□□□ 0.37
RFPL2O75678 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.38■□□□□ 0.37
RFPL2O75678 AL589739.1-201ENST00000607720 493 ntBASIC17.38■□□□□ 0.37
RFPL2O75678 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RFPL2O75678 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.38■□□□□ 0.37
RFPL2O75678 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RFPL2O75678 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFPL2O75678 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
RFPL2O75678 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RFPL2O75678 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
RFPL2O75678 AL035456.1-201ENST00000456064 1369 ntBASIC17.38■□□□□ 0.37
RFPL2O75678 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFPL2O75678 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFPL2O75678 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RFPL2O75678 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
RFPL2O75678 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFPL2O75678 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RFPL2O75678 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFPL2O75678 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.37■□□□□ 0.37
RFPL2O75678 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFPL2O75678 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RFPL2O75678 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFPL2O75678 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFPL2O75678 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFPL2O75678 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RFPL2O75678 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.37■□□□□ 0.37
RFPL2O75678 FAM220BP-201ENST00000377689 816 ntBASIC17.37■□□□□ 0.37
RFPL2O75678 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.37■□□□□ 0.37
RFPL2O75678 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFPL2O75678 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.37■□□□□ 0.37
RFPL2O75678 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RFPL2O75678 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.37■□□□□ 0.37
RFPL2O75678 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFPL2O75678 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.37■□□□□ 0.37
RFPL2O75678 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.37■□□□□ 0.37
RFPL2O75678 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.37■□□□□ 0.37
RFPL2O75678 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.37■□□□□ 0.37
RFPL2O75678 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.37■□□□□ 0.37
RFPL2O75678 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.37■□□□□ 0.37
RFPL2O75678 RN7SL828P-201ENST00000607615 303 ntBASIC17.37■□□□□ 0.37
RFPL2O75678 AL844908.2-201ENST00000609461 460 ntBASIC17.37■□□□□ 0.37
RFPL2O75678 AL008721.1-201ENST00000609964 604 ntBASIC17.37■□□□□ 0.37
RFPL2O75678 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.37■□□□□ 0.37
RFPL2O75678 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFPL2O75678 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFPL2O75678 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFPL2O75678 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFPL2O75678 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RFPL2O75678 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RFPL2O75678 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RFPL2O75678 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RFPL2O75678 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFPL2O75678 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.37■□□□□ 0.37
RFPL2O75678 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFPL2O75678 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.37■□□□□ 0.37
RFPL2O75678 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.37■□□□□ 0.37
RFPL2O75678 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.37■□□□□ 0.37
RFPL2O75678 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RFPL2O75678 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFPL2O75678 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFPL2O75678 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFPL2O75678 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.36■□□□□ 0.37
RFPL2O75678 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
RFPL2O75678 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.36■□□□□ 0.37
RFPL2O75678 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFPL2O75678 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RFPL2O75678 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFPL2O75678 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RFPL2O75678 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.36■□□□□ 0.37
RFPL2O75678 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.36■□□□□ 0.37
RFPL2O75678 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.36■□□□□ 0.37
RFPL2O75678 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFPL2O75678 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFPL2O75678 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFPL2O75678 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFPL2O75678 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFPL2O75678 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFPL2O75678 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFPL2O75678 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
RFPL2O75678 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFPL2O75678 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.36■□□□□ 0.37
RFPL2O75678 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFPL2O75678 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.36■□□□□ 0.37
RFPL2O75678 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.36■□□□□ 0.37
RFPL2O75678 BANF1P1-201ENST00000553684 263 ntBASIC17.36■□□□□ 0.37
RFPL2O75678 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.36■□□□□ 0.37
RFPL2O75678 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.36■□□□□ 0.37
RFPL2O75678 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.36■□□□□ 0.37
RFPL2O75678 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.36■□□□□ 0.37
RFPL2O75678 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.36■□□□□ 0.37
RFPL2O75678 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.36■□□□□ 0.37
RFPL2O75678 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFPL2O75678 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFPL2O75678 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RFPL2O75678 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFPL2O75678 CETN4P-206ENST00000642099 2168 ntBASIC17.36■□□□□ 0.37
RFPL2O75678 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFPL2O75678 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFPL2O75678 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms