Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE3O75131 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.07■□□□□ 0.16
CPNE3O75131 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE3O75131 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
CPNE3O75131 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE3O75131 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE3O75131 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
CPNE3O75131 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE3O75131 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE3O75131 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE3O75131 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.07■□□□□ 0.16
CPNE3O75131 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE3O75131 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE3O75131 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CPNE3O75131 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE3O75131 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE3O75131 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE3O75131 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE3O75131 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CPNE3O75131 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE3O75131 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE3O75131 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE3O75131 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE3O75131 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE3O75131 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE3O75131 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE3O75131 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE3O75131 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.06■□□□□ 0.16
CPNE3O75131 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE3O75131 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.06■□□□□ 0.16
CPNE3O75131 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE3O75131 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE3O75131 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.06■□□□□ 0.16
CPNE3O75131 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE3O75131 FAM86C2P-203ENST00000528684 1004 ntBASIC16.06■□□□□ 0.16
CPNE3O75131 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.06■□□□□ 0.16
CPNE3O75131 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.06■□□□□ 0.16
CPNE3O75131 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.06■□□□□ 0.16
CPNE3O75131 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.06■□□□□ 0.16
CPNE3O75131 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.06■□□□□ 0.16
CPNE3O75131 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CPNE3O75131 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE3O75131 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE3O75131 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE3O75131 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE3O75131 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE3O75131 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE3O75131 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.06■□□□□ 0.16
CPNE3O75131 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CPNE3O75131 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE3O75131 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE3O75131 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE3O75131 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CPNE3O75131 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.05■□□□□ 0.16
CPNE3O75131 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CPNE3O75131 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE3O75131 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CPNE3O75131 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CPNE3O75131 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE3O75131 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE3O75131 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CPNE3O75131 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE3O75131 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE3O75131 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE3O75131 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE3O75131 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE3O75131 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE3O75131 AC004461.1-201ENST00000412461 403 ntBASIC16.05■□□□□ 0.16
CPNE3O75131 AL355306.1-201ENST00000415580 579 ntBASIC16.05■□□□□ 0.16
CPNE3O75131 AL645939.2-201ENST00000427340 991 ntBASIC16.05■□□□□ 0.16
CPNE3O75131 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.05■□□□□ 0.16
CPNE3O75131 HMGN1P19-201ENST00000436976 333 ntBASIC16.05■□□□□ 0.16
CPNE3O75131 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE3O75131 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE3O75131 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.05■□□□□ 0.16
CPNE3O75131 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.05■□□□□ 0.16
CPNE3O75131 RFPL4AP1-201ENST00000530883 850 ntBASIC16.05■□□□□ 0.16
CPNE3O75131 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.05■□□□□ 0.16
CPNE3O75131 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.05■□□□□ 0.16
CPNE3O75131 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
CPNE3O75131 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CPNE3O75131 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CPNE3O75131 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.05■□□□□ 0.16
CPNE3O75131 AC022145.2-201ENST00000598203 171 ntBASIC16.05■□□□□ 0.16
CPNE3O75131 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE3O75131 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE3O75131 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE3O75131 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE3O75131 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE3O75131 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CPNE3O75131 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
CPNE3O75131 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE3O75131 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE3O75131 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE3O75131 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE3O75131 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE3O75131 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CPNE3O75131 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CPNE3O75131 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CPNE3O75131 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms