Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PRAMEF2O60811 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF2O60811 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF2O60811 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF2O60811 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF2O60811 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF2O60811 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF2O60811 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
PRAMEF2O60811 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PRAMEF2O60811 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
PRAMEF2O60811 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF2O60811 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF2O60811 AL645728.1-201ENST00000366221 2101 ntBASIC15.68■□□□□ 0.1
PRAMEF2O60811 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.68■□□□□ 0.1
PRAMEF2O60811 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF2O60811 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF2O60811 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
PRAMEF2O60811 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF2O60811 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF2O60811 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF2O60811 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF2O60811 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF2O60811 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF2O60811 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF2O60811 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
PRAMEF2O60811 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.68■□□□□ 0.1
PRAMEF2O60811 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF2O60811 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF2O60811 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF2O60811 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF2O60811 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF2O60811 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF2O60811 FAM185BP-201ENST00000443595 716 ntBASIC15.68■□□□□ 0.1
PRAMEF2O60811 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.68■□□□□ 0.1
PRAMEF2O60811 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF2O60811 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PRAMEF2O60811 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF2O60811 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.68■□□□□ 0.1
PRAMEF2O60811 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF2O60811 AL355385.1-201ENST00000606123 409 ntBASIC15.68■□□□□ 0.1
PRAMEF2O60811 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF2O60811 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF2O60811 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PRAMEF2O60811 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.68■□□□□ 0.1
PRAMEF2O60811 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PRAMEF2O60811 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PRAMEF2O60811 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PRAMEF2O60811 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.68■□□□□ 0.1
PRAMEF2O60811 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF2O60811 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF2O60811 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF2O60811 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PRAMEF2O60811 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF2O60811 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PRAMEF2O60811 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PRAMEF2O60811 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.67■□□□□ 0.1
PRAMEF2O60811 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF2O60811 AC078925.2-201ENST00000624013 1973 ntBASIC15.67■□□□□ 0.1
PRAMEF2O60811 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PRAMEF2O60811 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF2O60811 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.67■□□□□ 0.1
PRAMEF2O60811 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF2O60811 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF2O60811 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PRAMEF2O60811 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PRAMEF2O60811 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF2O60811 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF2O60811 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF2O60811 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF2O60811 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF2O60811 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF2O60811 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.67■□□□□ 0.1
PRAMEF2O60811 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.67■□□□□ 0.1
PRAMEF2O60811 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PRAMEF2O60811 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF2O60811 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF2O60811 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.67■□□□□ 0.1
PRAMEF2O60811 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF2O60811 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
PRAMEF2O60811 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.67■□□□□ 0.1
PRAMEF2O60811 AC087641.1-201ENST00000557561 1021 ntBASIC15.67■□□□□ 0.1
PRAMEF2O60811 AL031432.2-201ENST00000566714 459 ntBASIC15.67■□□□□ 0.1
PRAMEF2O60811 AL928711.1-201ENST00000570165 459 ntBASIC15.67■□□□□ 0.1
PRAMEF2O60811 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF2O60811 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.67■□□□□ 0.1
PRAMEF2O60811 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.67■□□□□ 0.1
PRAMEF2O60811 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.67■□□□□ 0.1
PRAMEF2O60811 AC068137.2-201ENST00000605408 478 ntBASIC15.67■□□□□ 0.1
PRAMEF2O60811 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.67■□□□□ 0.1
PRAMEF2O60811 ACTL9-202ENST00000612068 1252 ntBASIC15.67■□□□□ 0.1
PRAMEF2O60811 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.67■□□□□ 0.1
PRAMEF2O60811 AL139011.1-202ENST00000642063 584 ntBASIC15.67■□□□□ 0.1
PRAMEF2O60811 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF2O60811 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF2O60811 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF2O60811 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF2O60811 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF2O60811 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF2O60811 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF2O60811 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms