Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCA5O60264 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCA5O60264 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCA5O60264 RNU1-129P-201ENST00000384064 167 ntBASIC20.58■□□□□ 0.89
SMARCA5O60264 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.58■□□□□ 0.89
SMARCA5O60264 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.58■□□□□ 0.89
SMARCA5O60264 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.58■□□□□ 0.89
SMARCA5O60264 AL031432.2-201ENST00000566714 459 ntBASIC20.58■□□□□ 0.89
SMARCA5O60264 AL928711.1-201ENST00000570165 459 ntBASIC20.58■□□□□ 0.89
SMARCA5O60264 U1.21-201ENST00000580816 167 ntBASIC20.58■□□□□ 0.89
SMARCA5O60264 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.58■□□□□ 0.89
SMARCA5O60264 AC023141.13-201ENST00000604991 943 ntBASIC20.58■□□□□ 0.89
SMARCA5O60264 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCA5O60264 AC027601.4-201ENST00000611259 610 ntBASIC20.58■□□□□ 0.89
SMARCA5O60264 AP001350.2-201ENST00000625104 1094 ntBASIC20.58■□□□□ 0.89
SMARCA5O60264 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMARCA5O60264 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMARCA5O60264 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMARCA5O60264 LINC02199-201ENST00000506655 2702 ntBASIC20.58■□□□□ 0.88
SMARCA5O60264 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMARCA5O60264 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SMARCA5O60264 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
SMARCA5O60264 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMARCA5O60264 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SMARCA5O60264 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
SMARCA5O60264 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SMARCA5O60264 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SMARCA5O60264 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCA5O60264 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
SMARCA5O60264 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.57■□□□□ 0.88
SMARCA5O60264 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SMARCA5O60264 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SMARCA5O60264 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCA5O60264 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC20.57■□□□□ 0.88
SMARCA5O60264 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCA5O60264 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCA5O60264 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCA5O60264 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SMARCA5O60264 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCA5O60264 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCA5O60264 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.57■□□□□ 0.88
SMARCA5O60264 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCA5O60264 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCA5O60264 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCA5O60264 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.57■□□□□ 0.88
SMARCA5O60264 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCA5O60264 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCA5O60264 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.57■□□□□ 0.88
SMARCA5O60264 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.57■□□□□ 0.88
SMARCA5O60264 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCA5O60264 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC20.57■□□□□ 0.88
SMARCA5O60264 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.57■□□□□ 0.88
SMARCA5O60264 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.57■□□□□ 0.88
SMARCA5O60264 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCA5O60264 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
SMARCA5O60264 ME2P1-201ENST00000426028 1970 ntBASIC20.57■□□□□ 0.88
SMARCA5O60264 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC20.57■□□□□ 0.88
SMARCA5O60264 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCA5O60264 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.57■□□□□ 0.88
SMARCA5O60264 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SMARCA5O60264 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCA5O60264 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMARCA5O60264 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SMARCA5O60264 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCA5O60264 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCA5O60264 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCA5O60264 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCA5O60264 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCA5O60264 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC20.56■□□□□ 0.88
SMARCA5O60264 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCA5O60264 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SMARCA5O60264 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCA5O60264 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCA5O60264 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.56■□□□□ 0.88
SMARCA5O60264 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.56■□□□□ 0.88
SMARCA5O60264 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
SMARCA5O60264 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.56■□□□□ 0.88
SMARCA5O60264 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.56■□□□□ 0.88
SMARCA5O60264 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.56■□□□□ 0.88
SMARCA5O60264 AL031055.1-201ENST00000606362 631 ntBASIC20.56■□□□□ 0.88
SMARCA5O60264 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
SMARCA5O60264 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCA5O60264 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.56■□□□□ 0.88
SMARCA5O60264 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCA5O60264 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SMARCA5O60264 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.56■□□□□ 0.88
SMARCA5O60264 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SMARCA5O60264 GPAA1P2-202ENST00000606848 1787 ntBASIC20.56■□□□□ 0.88
SMARCA5O60264 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SMARCA5O60264 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCA5O60264 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCA5O60264 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
SMARCA5O60264 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCA5O60264 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMARCA5O60264 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC20.56■□□□□ 0.88
SMARCA5O60264 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCA5O60264 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCA5O60264 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.55■□□□□ 0.88
SMARCA5O60264 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.55■□□□□ 0.88
SMARCA5O60264 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms