Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RGPD3A6NKT7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RGPD3A6NKT7 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 AZGP1P1-201ENST00000411909 902 ntBASIC20.67■□□□□ 0.9
RGPD3A6NKT7 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 MIR3619-201ENST00000579667 83 ntBASIC20.67■□□□□ 0.9
RGPD3A6NKT7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 BTBD6P1-201ENST00000412176 1267 ntBASIC20.67■□□□□ 0.9
RGPD3A6NKT7 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 AC134915.1-201ENST00000426461 574 ntBASIC20.67■□□□□ 0.9
RGPD3A6NKT7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 AC022137.2-201ENST00000503482 481 ntBASIC20.67■□□□□ 0.9
RGPD3A6NKT7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 ADM-202ENST00000524948 584 ntTSL 2 BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 AP006547.1-201ENST00000563435 692 ntBASIC20.67■□□□□ 0.9
RGPD3A6NKT7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RGPD3A6NKT7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RGPD3A6NKT7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
RGPD3A6NKT7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RGPD3A6NKT7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RGPD3A6NKT7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RGPD3A6NKT7 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RGPD3A6NKT7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
RGPD3A6NKT7 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC20.66■□□□□ 0.9
RGPD3A6NKT7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC20.66■□□□□ 0.9
RGPD3A6NKT7 AL591846.1-201ENST00000451736 433 ntBASIC20.66■□□□□ 0.9
RGPD3A6NKT7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC20.66■□□□□ 0.9
RGPD3A6NKT7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC20.66■□□□□ 0.9
RGPD3A6NKT7 CLUHP6-201ENST00000580789 941 ntBASIC20.66■□□□□ 0.9
RGPD3A6NKT7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RGPD3A6NKT7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RGPD3A6NKT7 AC138627.1-207ENST00000641560 1006 ntBASIC20.66■□□□□ 0.9
RGPD3A6NKT7 AL139011.1-202ENST00000642063 584 ntBASIC20.66■□□□□ 0.9
RGPD3A6NKT7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RGPD3A6NKT7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RGPD3A6NKT7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.66■□□□□ 0.9
RGPD3A6NKT7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 RPS3-201ENST00000278572 907 ntTSL 3 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 AL662890.1-201ENST00000396818 632 ntBASIC20.65■□□□□ 0.9
RGPD3A6NKT7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 APOA2-204ENST00000464492 530 ntTSL 3 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 HIST2H2BC-201ENST00000498492 580 ntBASIC20.65■□□□□ 0.9
RGPD3A6NKT7 RPL8-205ENST00000527914 551 ntTSL 3 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC20.65■□□□□ 0.9
RGPD3A6NKT7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RGPD3A6NKT7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RGPD3A6NKT7 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms