Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 FADS2-205ENST00000517839 469 ntTSL 3 BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 WFDC1-204ENST00000613603 549 ntBASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 AL512652.2-201ENST00000625156 1716 ntBASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 AL390961.4-201ENST00000623958 2535 ntBASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LOC102724428A0A0B4J2F2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.97■□□□□ 0.95
LOC102724428A0A0B4J2F2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LOC102724428A0A0B4J2F2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LOC102724428A0A0B4J2F2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
LOC102724428A0A0B4J2F2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LOC102724428A0A0B4J2F2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LOC102724428A0A0B4J2F2 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
LOC102724428A0A0B4J2F2 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC20.97■□□□□ 0.95
LOC102724428A0A0B4J2F2 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC20.97■□□□□ 0.95
LOC102724428A0A0B4J2F2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LOC102724428A0A0B4J2F2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LOC102724428A0A0B4J2F2 SNX29P1-201ENST00000548357 1007 ntBASIC20.97■□□□□ 0.95
LOC102724428A0A0B4J2F2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC20.97■□□□□ 0.95
LOC102724428A0A0B4J2F2 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LOC102724428A0A0B4J2F2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
LOC102724428A0A0B4J2F2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
LOC102724428A0A0B4J2F2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LOC102724428A0A0B4J2F2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.97■□□□□ 0.95
LOC102724428A0A0B4J2F2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LOC102724428A0A0B4J2F2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
LOC102724428A0A0B4J2F2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LOC102724428A0A0B4J2F2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.97■□□□□ 0.95
LOC102724428A0A0B4J2F2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 AC007389.4-201ENST00000454674 793 ntBASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 AC092337.1-201ENST00000568699 1129 ntBASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 COX11-210ENST00000639671 696 ntBASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
LOC102724428A0A0B4J2F2 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
LOC102724428A0A0B4J2F2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.95■□□□□ 0.94
LOC102724428A0A0B4J2F2 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms