Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC28.4■■■□□ 2.14
DDX49Q9Y6V7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC28.4■■■□□ 2.14
DDX49Q9Y6V7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
DDX49Q9Y6V7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
DDX49Q9Y6V7 AL592293.1-201ENST00000502889 1188 ntBASIC28.4■■■□□ 2.14
DDX49Q9Y6V7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
DDX49Q9Y6V7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
DDX49Q9Y6V7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
DDX49Q9Y6V7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
DDX49Q9Y6V7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
DDX49Q9Y6V7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
DDX49Q9Y6V7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
DDX49Q9Y6V7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.39■■■□□ 2.14
DDX49Q9Y6V7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC28.39■■■□□ 2.14
DDX49Q9Y6V7 SMPD5-203ENST00000639008 1464 ntBASIC28.39■■■□□ 2.13
DDX49Q9Y6V7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
DDX49Q9Y6V7 DUX4L18-201ENST00000553347 1267 ntBASIC28.38■■■□□ 2.13
DDX49Q9Y6V7 AC129492.7-201ENST00000622992 756 ntBASIC28.38■■■□□ 2.13
DDX49Q9Y6V7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC28.38■■■□□ 2.13
DDX49Q9Y6V7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
DDX49Q9Y6V7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
DDX49Q9Y6V7 AC142472.1-201ENST00000612013 1741 ntBASIC28.38■■■□□ 2.13
DDX49Q9Y6V7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
DDX49Q9Y6V7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.37■■■□□ 2.13
DDX49Q9Y6V7 AC133552.2-201ENST00000619106 1032 ntBASIC28.37■■■□□ 2.13
DDX49Q9Y6V7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC28.37■■■□□ 2.13
DDX49Q9Y6V7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
DDX49Q9Y6V7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
DDX49Q9Y6V7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
DDX49Q9Y6V7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
DDX49Q9Y6V7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
DDX49Q9Y6V7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
DDX49Q9Y6V7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
DDX49Q9Y6V7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC28.35■■■□□ 2.13
DDX49Q9Y6V7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC28.35■■■□□ 2.13
DDX49Q9Y6V7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC28.35■■■□□ 2.13
DDX49Q9Y6V7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
DDX49Q9Y6V7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
DDX49Q9Y6V7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
DDX49Q9Y6V7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
DDX49Q9Y6V7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
DDX49Q9Y6V7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
DDX49Q9Y6V7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
DDX49Q9Y6V7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
DDX49Q9Y6V7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
DDX49Q9Y6V7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
DDX49Q9Y6V7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC28.33■■■□□ 2.13
DDX49Q9Y6V7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC28.33■■■□□ 2.13
DDX49Q9Y6V7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC28.33■■■□□ 2.13
DDX49Q9Y6V7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC28.33■■■□□ 2.13
DDX49Q9Y6V7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC28.33■■■□□ 2.13
DDX49Q9Y6V7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC28.33■■■□□ 2.13
DDX49Q9Y6V7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
DDX49Q9Y6V7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28.32■■■□□ 2.12
DDX49Q9Y6V7 AC025884.2-201ENST00000553429 711 ntBASIC28.32■■■□□ 2.12
DDX49Q9Y6V7 AC026202.3-201ENST00000600805 1127 ntBASIC28.32■■■□□ 2.12
DDX49Q9Y6V7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
DDX49Q9Y6V7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
DDX49Q9Y6V7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
DDX49Q9Y6V7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.32■■■□□ 2.12
DDX49Q9Y6V7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
DDX49Q9Y6V7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC28.32■■■□□ 2.12
DDX49Q9Y6V7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC28.31■■■□□ 2.12
DDX49Q9Y6V7 REST-210ENST00000638187 1334 ntTSL 5 BASIC28.31■■■□□ 2.12
DDX49Q9Y6V7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
DDX49Q9Y6V7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
DDX49Q9Y6V7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
DDX49Q9Y6V7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
DDX49Q9Y6V7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
DDX49Q9Y6V7 AC142381.3-201ENST00000568208 1670 ntBASIC28.29■■■□□ 2.12
DDX49Q9Y6V7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
DDX49Q9Y6V7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC28.29■■■□□ 2.12
DDX49Q9Y6V7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
DDX49Q9Y6V7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
DDX49Q9Y6V7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC28.29■■■□□ 2.12
DDX49Q9Y6V7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
DDX49Q9Y6V7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC28.29■■■□□ 2.12
DDX49Q9Y6V7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC28.29■■■□□ 2.12
DDX49Q9Y6V7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
DDX49Q9Y6V7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
DDX49Q9Y6V7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC28.28■■■□□ 2.12
DDX49Q9Y6V7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
DDX49Q9Y6V7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
DDX49Q9Y6V7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC28.28■■■□□ 2.12
DDX49Q9Y6V7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
DDX49Q9Y6V7 RARRES2P1-201ENST00000474487 481 ntBASIC28.28■■■□□ 2.12
DDX49Q9Y6V7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
DDX49Q9Y6V7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC28.28■■■□□ 2.12
DDX49Q9Y6V7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
DDX49Q9Y6V7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
DDX49Q9Y6V7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC28.27■■■□□ 2.12
DDX49Q9Y6V7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
DDX49Q9Y6V7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
DDX49Q9Y6V7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC28.27■■■□□ 2.12
DDX49Q9Y6V7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
DDX49Q9Y6V7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
DDX49Q9Y6V7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC28.27■■■□□ 2.12
DDX49Q9Y6V7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
DDX49Q9Y6V7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
DDX49Q9Y6V7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC28.26■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms