Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.7■■□□□ 1.86
SCN10AQ9Y5Y9 AC120024.1-201ENST00000562672 995 ntBASIC26.7■■□□□ 1.86
SCN10AQ9Y5Y9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SCN10AQ9Y5Y9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.69■■□□□ 1.86
SCN10AQ9Y5Y9 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SCN10AQ9Y5Y9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.69■■□□□ 1.86
SCN10AQ9Y5Y9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SCN10AQ9Y5Y9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SCN10AQ9Y5Y9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SCN10AQ9Y5Y9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
SCN10AQ9Y5Y9 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SCN10AQ9Y5Y9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.67■■□□□ 1.86
SCN10AQ9Y5Y9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.67■■□□□ 1.86
SCN10AQ9Y5Y9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.67■■□□□ 1.86
SCN10AQ9Y5Y9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SCN10AQ9Y5Y9 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SCN10AQ9Y5Y9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SCN10AQ9Y5Y9 AC131281.2-201ENST00000520478 145 ntBASIC26.67■■□□□ 1.86
SCN10AQ9Y5Y9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
SCN10AQ9Y5Y9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.66■■□□□ 1.86
SCN10AQ9Y5Y9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.66■■□□□ 1.86
SCN10AQ9Y5Y9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.66■■□□□ 1.86
SCN10AQ9Y5Y9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
SCN10AQ9Y5Y9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.66■■□□□ 1.86
SCN10AQ9Y5Y9 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.65■■□□□ 1.86
SCN10AQ9Y5Y9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SCN10AQ9Y5Y9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.65■■□□□ 1.86
SCN10AQ9Y5Y9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SCN10AQ9Y5Y9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SCN10AQ9Y5Y9 AC008406.3-201ENST00000620001 1374 ntBASIC26.64■■□□□ 1.85
SCN10AQ9Y5Y9 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.64■■□□□ 1.85
SCN10AQ9Y5Y9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SCN10AQ9Y5Y9 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SCN10AQ9Y5Y9 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SCN10AQ9Y5Y9 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
SCN10AQ9Y5Y9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.63■■□□□ 1.85
SCN10AQ9Y5Y9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.62■■□□□ 1.85
SCN10AQ9Y5Y9 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
SCN10AQ9Y5Y9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SCN10AQ9Y5Y9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
SCN10AQ9Y5Y9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.61■■□□□ 1.85
SCN10AQ9Y5Y9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SCN10AQ9Y5Y9 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
SCN10AQ9Y5Y9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
SCN10AQ9Y5Y9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.6■■□□□ 1.85
SCN10AQ9Y5Y9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SCN10AQ9Y5Y9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.6■■□□□ 1.85
SCN10AQ9Y5Y9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.6■■□□□ 1.85
SCN10AQ9Y5Y9 AP004609.3-201ENST00000610705 1884 ntBASIC26.59■■□□□ 1.85
SCN10AQ9Y5Y9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.59■■□□□ 1.85
SCN10AQ9Y5Y9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
SCN10AQ9Y5Y9 AC092028.1-203ENST00000608262 953 ntBASIC26.59■■□□□ 1.85
SCN10AQ9Y5Y9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SCN10AQ9Y5Y9 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SCN10AQ9Y5Y9 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SCN10AQ9Y5Y9 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
SCN10AQ9Y5Y9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.58■■□□□ 1.85
SCN10AQ9Y5Y9 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.58■■□□□ 1.85
SCN10AQ9Y5Y9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SCN10AQ9Y5Y9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.57■■□□□ 1.84
SCN10AQ9Y5Y9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
SCN10AQ9Y5Y9 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SCN10AQ9Y5Y9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SCN10AQ9Y5Y9 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.56■■□□□ 1.84
SCN10AQ9Y5Y9 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.56■■□□□ 1.84
SCN10AQ9Y5Y9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.56■■□□□ 1.84
SCN10AQ9Y5Y9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.56■■□□□ 1.84
SCN10AQ9Y5Y9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.56■■□□□ 1.84
SCN10AQ9Y5Y9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
SCN10AQ9Y5Y9 AC011551.1-201ENST00000614101 683 ntBASIC26.56■■□□□ 1.84
SCN10AQ9Y5Y9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
SCN10AQ9Y5Y9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.56■■□□□ 1.84
SCN10AQ9Y5Y9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SCN10AQ9Y5Y9 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.55■■□□□ 1.84
SCN10AQ9Y5Y9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
SCN10AQ9Y5Y9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.55■■□□□ 1.84
SCN10AQ9Y5Y9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.55■■□□□ 1.84
SCN10AQ9Y5Y9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SCN10AQ9Y5Y9 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SCN10AQ9Y5Y9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
SCN10AQ9Y5Y9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.54■■□□□ 1.84
SCN10AQ9Y5Y9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.54■■□□□ 1.84
SCN10AQ9Y5Y9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
SCN10AQ9Y5Y9 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
SCN10AQ9Y5Y9 TSPY9P-201ENST00000440215 945 ntBASIC26.53■■□□□ 1.84
SCN10AQ9Y5Y9 TSPY11P-201ENST00000442607 1045 ntBASIC26.53■■□□□ 1.84
SCN10AQ9Y5Y9 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SCN10AQ9Y5Y9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SCN10AQ9Y5Y9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SCN10AQ9Y5Y9 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SCN10AQ9Y5Y9 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.52■■□□□ 1.84
SCN10AQ9Y5Y9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.52■■□□□ 1.84
SCN10AQ9Y5Y9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SCN10AQ9Y5Y9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SCN10AQ9Y5Y9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.51■■□□□ 1.83
SCN10AQ9Y5Y9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.51■■□□□ 1.83
SCN10AQ9Y5Y9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
SCN10AQ9Y5Y9 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
SCN10AQ9Y5Y9 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SCN10AQ9Y5Y9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms