Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC27.54■■■□□ 2
TRIM17Q9Y577 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC27.54■■■□□ 2
TRIM17Q9Y577 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
TRIM17Q9Y577 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC27.53■■■□□ 2
TRIM17Q9Y577 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC27.53■■■□□ 2
TRIM17Q9Y577 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
TRIM17Q9Y577 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.53■■■□□ 2
TRIM17Q9Y577 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC27.53■■■□□ 2
TRIM17Q9Y577 PARL-206ENST00000435888 1098 ntTSL 5 BASIC27.53■■■□□ 2
TRIM17Q9Y577 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
TRIM17Q9Y577 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TRIM17Q9Y577 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC27.52■■■□□ 2
TRIM17Q9Y577 SENP5-202ENST00000419026 973 ntTSL 3 BASIC27.52■■■□□ 2
TRIM17Q9Y577 RASSF1-AS1-201ENST00000629828 790 ntBASIC27.52■■■□□ 2
TRIM17Q9Y577 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.51■■■□□ 2
TRIM17Q9Y577 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC27.51■■□□□ 1.99
TRIM17Q9Y577 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
TRIM17Q9Y577 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
TRIM17Q9Y577 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
TRIM17Q9Y577 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
TRIM17Q9Y577 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
TRIM17Q9Y577 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC27.5■■□□□ 1.99
TRIM17Q9Y577 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC27.5■■□□□ 1.99
TRIM17Q9Y577 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC27.49■■□□□ 1.99
TRIM17Q9Y577 SUDS3P1-201ENST00000505831 966 ntBASIC27.49■■□□□ 1.99
TRIM17Q9Y577 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
TRIM17Q9Y577 AL031432.3-201ENST00000607698 485 ntBASIC27.49■■□□□ 1.99
TRIM17Q9Y577 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
TRIM17Q9Y577 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27.49■■□□□ 1.99
TRIM17Q9Y577 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TRIM17Q9Y577 AL139393.2-201ENST00000608721 2025 ntBASIC27.48■■□□□ 1.99
TRIM17Q9Y577 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TRIM17Q9Y577 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
TRIM17Q9Y577 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC27.47■■□□□ 1.99
TRIM17Q9Y577 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC27.47■■□□□ 1.99
TRIM17Q9Y577 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC27.46■■□□□ 1.99
TRIM17Q9Y577 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
TRIM17Q9Y577 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
TRIM17Q9Y577 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
TRIM17Q9Y577 ANKRD20A6P-201ENST00000618763 204 ntBASIC27.46■■□□□ 1.99
TRIM17Q9Y577 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC27.46■■□□□ 1.99
TRIM17Q9Y577 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC27.46■■□□□ 1.99
TRIM17Q9Y577 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC27.46■■□□□ 1.99
TRIM17Q9Y577 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
TRIM17Q9Y577 UNC93B3-201ENST00000308076 687 ntBASIC27.45■■□□□ 1.98
TRIM17Q9Y577 HYI-206ENST00000372434 1025 ntTSL 5 BASIC27.45■■□□□ 1.98
TRIM17Q9Y577 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC27.45■■□□□ 1.98
TRIM17Q9Y577 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
TRIM17Q9Y577 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
TRIM17Q9Y577 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
TRIM17Q9Y577 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
TRIM17Q9Y577 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
TRIM17Q9Y577 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC27.44■■□□□ 1.98
TRIM17Q9Y577 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC27.44■■□□□ 1.98
TRIM17Q9Y577 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
TRIM17Q9Y577 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
TRIM17Q9Y577 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
TRIM17Q9Y577 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
TRIM17Q9Y577 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC27.43■■□□□ 1.98
TRIM17Q9Y577 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC27.43■■□□□ 1.98
TRIM17Q9Y577 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC27.43■■□□□ 1.98
TRIM17Q9Y577 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
TRIM17Q9Y577 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
TRIM17Q9Y577 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC27.42■■□□□ 1.98
TRIM17Q9Y577 CD72-202ENST00000378430 585 ntTSL 3 BASIC27.42■■□□□ 1.98
TRIM17Q9Y577 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC27.42■■□□□ 1.98
TRIM17Q9Y577 AL136162.1-201ENST00000607711 1078 ntBASIC27.42■■□□□ 1.98
TRIM17Q9Y577 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
TRIM17Q9Y577 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
TRIM17Q9Y577 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
TRIM17Q9Y577 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TRIM17Q9Y577 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TRIM17Q9Y577 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC27.41■■□□□ 1.98
TRIM17Q9Y577 CLTA-210ENST00000540080 989 ntTSL 2 BASIC27.41■■□□□ 1.98
TRIM17Q9Y577 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC27.41■■□□□ 1.98
TRIM17Q9Y577 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TRIM17Q9Y577 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TRIM17Q9Y577 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TRIM17Q9Y577 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TRIM17Q9Y577 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC27.4■■□□□ 1.98
TRIM17Q9Y577 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
TRIM17Q9Y577 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.39■■□□□ 1.98
TRIM17Q9Y577 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC27.39■■□□□ 1.98
TRIM17Q9Y577 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC27.38■■□□□ 1.97
TRIM17Q9Y577 AC105265.2-201ENST00000467189 838 ntBASIC27.38■■□□□ 1.97
TRIM17Q9Y577 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC27.38■■□□□ 1.97
TRIM17Q9Y577 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC27.38■■□□□ 1.97
TRIM17Q9Y577 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC27.38■■□□□ 1.97
TRIM17Q9Y577 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TRIM17Q9Y577 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TRIM17Q9Y577 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
TRIM17Q9Y577 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
TRIM17Q9Y577 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TRIM17Q9Y577 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC27.37■■□□□ 1.97
TRIM17Q9Y577 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
TRIM17Q9Y577 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC27.36■■□□□ 1.97
TRIM17Q9Y577 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC27.36■■□□□ 1.97
TRIM17Q9Y577 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC27.36■■□□□ 1.97
TRIM17Q9Y577 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
TRIM17Q9Y577 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms