Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC33■■■□□ 2.87
NINLQ9Y2I6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
NINLQ9Y2I6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC32.99■■■□□ 2.87
NINLQ9Y2I6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
NINLQ9Y2I6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC32.99■■■□□ 2.87
NINLQ9Y2I6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC32.99■■■□□ 2.87
NINLQ9Y2I6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC32.98■■■□□ 2.87
NINLQ9Y2I6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC32.98■■■□□ 2.87
NINLQ9Y2I6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC32.98■■■□□ 2.87
NINLQ9Y2I6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
NINLQ9Y2I6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC32.98■■■□□ 2.87
NINLQ9Y2I6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC32.97■■■□□ 2.87
NINLQ9Y2I6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
NINLQ9Y2I6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
NINLQ9Y2I6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC32.97■■■□□ 2.87
NINLQ9Y2I6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC32.97■■■□□ 2.87
NINLQ9Y2I6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
NINLQ9Y2I6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC32.96■■■□□ 2.87
NINLQ9Y2I6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
NINLQ9Y2I6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC32.96■■■□□ 2.87
NINLQ9Y2I6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC32.96■■■□□ 2.87
NINLQ9Y2I6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC32.96■■■□□ 2.87
NINLQ9Y2I6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC32.95■■■□□ 2.87
NINLQ9Y2I6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC32.95■■■□□ 2.86
NINLQ9Y2I6 HES6-204ENST00000409182 863 ntTSL 2 BASIC32.95■■■□□ 2.86
NINLQ9Y2I6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC32.94■■■□□ 2.86
NINLQ9Y2I6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
NINLQ9Y2I6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC32.94■■■□□ 2.86
NINLQ9Y2I6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC32.94■■■□□ 2.86
NINLQ9Y2I6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
NINLQ9Y2I6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
NINLQ9Y2I6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC32.94■■■□□ 2.86
NINLQ9Y2I6 THA1P-201ENST00000590384 1145 ntBASIC32.94■■■□□ 2.86
NINLQ9Y2I6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC32.94■■■□□ 2.86
NINLQ9Y2I6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC32.93■■■□□ 2.86
NINLQ9Y2I6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
NINLQ9Y2I6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC32.93■■■□□ 2.86
NINLQ9Y2I6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC32.93■■■□□ 2.86
NINLQ9Y2I6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC32.92■■■□□ 2.86
NINLQ9Y2I6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC32.92■■■□□ 2.86
NINLQ9Y2I6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
NINLQ9Y2I6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC32.92■■■□□ 2.86
NINLQ9Y2I6 KRT18P24-201ENST00000344739 1156 ntBASIC32.92■■■□□ 2.86
NINLQ9Y2I6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC32.92■■■□□ 2.86
NINLQ9Y2I6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC32.92■■■□□ 2.86
NINLQ9Y2I6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
NINLQ9Y2I6 GUSBP5-201ENST00000418136 578 ntBASIC32.91■■■□□ 2.86
NINLQ9Y2I6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
NINLQ9Y2I6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC32.91■■■□□ 2.86
NINLQ9Y2I6 Z92544.1-202ENST00000571933 1220 ntBASIC32.91■■■□□ 2.86
NINLQ9Y2I6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC32.91■■■□□ 2.86
NINLQ9Y2I6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC32.9■■■□□ 2.86
NINLQ9Y2I6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC32.9■■■□□ 2.86
NINLQ9Y2I6 OR2A1-AS1-204ENST00000470435 602 ntBASIC32.9■■■□□ 2.86
NINLQ9Y2I6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC32.9■■■□□ 2.86
NINLQ9Y2I6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
NINLQ9Y2I6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC32.9■■■□□ 2.86
NINLQ9Y2I6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
NINLQ9Y2I6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC32.89■■■□□ 2.86
NINLQ9Y2I6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
NINLQ9Y2I6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
NINLQ9Y2I6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
NINLQ9Y2I6 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC32.88■■■□□ 2.85
NINLQ9Y2I6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
NINLQ9Y2I6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC32.88■■■□□ 2.85
NINLQ9Y2I6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC32.88■■■□□ 2.85
NINLQ9Y2I6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
NINLQ9Y2I6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC32.88■■■□□ 2.85
NINLQ9Y2I6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
NINLQ9Y2I6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
NINLQ9Y2I6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC32.87■■■□□ 2.85
NINLQ9Y2I6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC32.87■■■□□ 2.85
NINLQ9Y2I6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
NINLQ9Y2I6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
NINLQ9Y2I6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC32.85■■■□□ 2.85
NINLQ9Y2I6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC32.85■■■□□ 2.85
NINLQ9Y2I6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
NINLQ9Y2I6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC32.85■■■□□ 2.85
NINLQ9Y2I6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC32.84■■■□□ 2.85
NINLQ9Y2I6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
NINLQ9Y2I6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC32.84■■■□□ 2.85
NINLQ9Y2I6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
NINLQ9Y2I6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC32.84■■■□□ 2.85
NINLQ9Y2I6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC32.84■■■□□ 2.85
NINLQ9Y2I6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
NINLQ9Y2I6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
NINLQ9Y2I6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC32.83■■■□□ 2.85
NINLQ9Y2I6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
NINLQ9Y2I6 AC011551.1-201ENST00000614101 683 ntBASIC32.83■■■□□ 2.85
NINLQ9Y2I6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC32.83■■■□□ 2.85
NINLQ9Y2I6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC32.82■■■□□ 2.84
NINLQ9Y2I6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
NINLQ9Y2I6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC32.82■■■□□ 2.84
NINLQ9Y2I6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC32.82■■■□□ 2.84
NINLQ9Y2I6 AC120024.1-201ENST00000562672 995 ntBASIC32.82■■■□□ 2.84
NINLQ9Y2I6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
NINLQ9Y2I6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC32.81■■■□□ 2.84
NINLQ9Y2I6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC32.81■■■□□ 2.84
NINLQ9Y2I6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
NINLQ9Y2I6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC32.8■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms