Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NOTCH3Q9UM47 AC131281.2-201ENST00000520478 145 ntBASIC18.34■□□□□ 0.53
NOTCH3Q9UM47 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NOTCH3Q9UM47 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NOTCH3Q9UM47 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.34■□□□□ 0.53
NOTCH3Q9UM47 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.33■□□□□ 0.53
NOTCH3Q9UM47 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NOTCH3Q9UM47 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.33■□□□□ 0.53
NOTCH3Q9UM47 UNC93B8-201ENST00000511903 705 ntBASIC18.33■□□□□ 0.53
NOTCH3Q9UM47 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NOTCH3Q9UM47 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.33■□□□□ 0.52
NOTCH3Q9UM47 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.33■□□□□ 0.52
NOTCH3Q9UM47 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NOTCH3Q9UM47 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NOTCH3Q9UM47 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NOTCH3Q9UM47 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NOTCH3Q9UM47 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NOTCH3Q9UM47 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NOTCH3Q9UM47 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NOTCH3Q9UM47 KRT18P24-201ENST00000344739 1156 ntBASIC18.32■□□□□ 0.52
NOTCH3Q9UM47 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NOTCH3Q9UM47 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NOTCH3Q9UM47 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NOTCH3Q9UM47 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NOTCH3Q9UM47 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NOTCH3Q9UM47 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NOTCH3Q9UM47 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.31■□□□□ 0.52
NOTCH3Q9UM47 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NOTCH3Q9UM47 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NOTCH3Q9UM47 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NOTCH3Q9UM47 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NOTCH3Q9UM47 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.31■□□□□ 0.52
NOTCH3Q9UM47 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NOTCH3Q9UM47 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NOTCH3Q9UM47 LONRF2P2-201ENST00000439212 571 ntBASIC18.29■□□□□ 0.52
NOTCH3Q9UM47 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.29■□□□□ 0.52
NOTCH3Q9UM47 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.29■□□□□ 0.52
NOTCH3Q9UM47 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NOTCH3Q9UM47 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NOTCH3Q9UM47 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NOTCH3Q9UM47 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NOTCH3Q9UM47 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NOTCH3Q9UM47 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NOTCH3Q9UM47 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NOTCH3Q9UM47 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.28■□□□□ 0.52
NOTCH3Q9UM47 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.28■□□□□ 0.52
NOTCH3Q9UM47 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.28■□□□□ 0.52
NOTCH3Q9UM47 PROC-203ENST00000409048 1586 ntTSL 5 BASIC18.28■□□□□ 0.52
NOTCH3Q9UM47 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NOTCH3Q9UM47 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC18.28■□□□□ 0.52
NOTCH3Q9UM47 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NOTCH3Q9UM47 KRT16P3-201ENST00000439127 1283 ntBASIC18.28■□□□□ 0.52
NOTCH3Q9UM47 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.28■□□□□ 0.52
NOTCH3Q9UM47 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NOTCH3Q9UM47 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
NOTCH3Q9UM47 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NOTCH3Q9UM47 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC18.27■□□□□ 0.52
NOTCH3Q9UM47 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NOTCH3Q9UM47 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NOTCH3Q9UM47 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.27■□□□□ 0.52
NOTCH3Q9UM47 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NOTCH3Q9UM47 MIR3621-201ENST00000580529 85 ntBASIC18.27■□□□□ 0.52
NOTCH3Q9UM47 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NOTCH3Q9UM47 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NOTCH3Q9UM47 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.27■□□□□ 0.51
NOTCH3Q9UM47 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.27■□□□□ 0.51
NOTCH3Q9UM47 AC137630.3-201ENST00000607245 391 ntBASIC18.27■□□□□ 0.51
NOTCH3Q9UM47 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.26■□□□□ 0.51
NOTCH3Q9UM47 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NOTCH3Q9UM47 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
NOTCH3Q9UM47 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NOTCH3Q9UM47 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NOTCH3Q9UM47 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NOTCH3Q9UM47 KRT18P10-201ENST00000388836 1287 ntBASIC18.26■□□□□ 0.51
NOTCH3Q9UM47 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NOTCH3Q9UM47 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.26■□□□□ 0.51
NOTCH3Q9UM47 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NOTCH3Q9UM47 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.26■□□□□ 0.51
NOTCH3Q9UM47 AC092028.1-203ENST00000608262 953 ntBASIC18.26■□□□□ 0.51
NOTCH3Q9UM47 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
NOTCH3Q9UM47 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NOTCH3Q9UM47 AC110285.6-201ENST00000617652 491 ntBASIC18.25■□□□□ 0.51
NOTCH3Q9UM47 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.25■□□□□ 0.51
NOTCH3Q9UM47 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NOTCH3Q9UM47 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NOTCH3Q9UM47 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NOTCH3Q9UM47 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.24■□□□□ 0.51
NOTCH3Q9UM47 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NOTCH3Q9UM47 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOTCH3Q9UM47 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOTCH3Q9UM47 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NOTCH3Q9UM47 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
NOTCH3Q9UM47 MIR638-201ENST00000385237 100 ntBASIC18.24■□□□□ 0.51
NOTCH3Q9UM47 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
NOTCH3Q9UM47 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.24■□□□□ 0.51
NOTCH3Q9UM47 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.24■□□□□ 0.51
NOTCH3Q9UM47 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.24■□□□□ 0.51
NOTCH3Q9UM47 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOTCH3Q9UM47 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOTCH3Q9UM47 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms