Protein–RNA interactions for Protein: Q9NY12

GAR1, H/ACA ribonucleoprotein complex subunit 1, humanhuman

Known RBP Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAR1Q9NY12 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GAR1Q9NY12 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.14■□□□□ 0.65
GAR1Q9NY12 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
GAR1Q9NY12 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
GAR1Q9NY12 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GAR1Q9NY12 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GAR1Q9NY12 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
GAR1Q9NY12 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
GAR1Q9NY12 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GAR1Q9NY12 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.13■□□□□ 0.65
GAR1Q9NY12 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GAR1Q9NY12 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.13■□□□□ 0.65
GAR1Q9NY12 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.12■□□□□ 0.65
GAR1Q9NY12 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GAR1Q9NY12 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.12■□□□□ 0.65
GAR1Q9NY12 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GAR1Q9NY12 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GAR1Q9NY12 AC068473.5-201ENST00000616428 2072 ntBASIC19.12■□□□□ 0.65
GAR1Q9NY12 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GAR1Q9NY12 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.11■□□□□ 0.65
GAR1Q9NY12 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.11■□□□□ 0.65
GAR1Q9NY12 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
GAR1Q9NY12 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
GAR1Q9NY12 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.11■□□□□ 0.65
GAR1Q9NY12 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.11■□□□□ 0.65
GAR1Q9NY12 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GAR1Q9NY12 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GAR1Q9NY12 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GAR1Q9NY12 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GAR1Q9NY12 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GAR1Q9NY12 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GAR1Q9NY12 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GAR1Q9NY12 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.1■□□□□ 0.65
GAR1Q9NY12 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
GAR1Q9NY12 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
GAR1Q9NY12 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GAR1Q9NY12 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GAR1Q9NY12 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
GAR1Q9NY12 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
GAR1Q9NY12 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GAR1Q9NY12 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GAR1Q9NY12 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
GAR1Q9NY12 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
GAR1Q9NY12 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GAR1Q9NY12 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
GAR1Q9NY12 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
GAR1Q9NY12 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
GAR1Q9NY12 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GAR1Q9NY12 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.08■□□□□ 0.64
GAR1Q9NY12 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
GAR1Q9NY12 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
GAR1Q9NY12 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
GAR1Q9NY12 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
GAR1Q9NY12 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
GAR1Q9NY12 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.08■□□□□ 0.64
GAR1Q9NY12 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GAR1Q9NY12 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
GAR1Q9NY12 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
GAR1Q9NY12 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.07■□□□□ 0.64
GAR1Q9NY12 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.07■□□□□ 0.64
GAR1Q9NY12 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.07■□□□□ 0.64
GAR1Q9NY12 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.07■□□□□ 0.64
GAR1Q9NY12 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.07■□□□□ 0.64
GAR1Q9NY12 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
GAR1Q9NY12 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GAR1Q9NY12 AL359258.2-201ENST00000564063 1566 ntBASIC19.06■□□□□ 0.64
GAR1Q9NY12 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
GAR1Q9NY12 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
GAR1Q9NY12 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
GAR1Q9NY12 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.06■□□□□ 0.64
GAR1Q9NY12 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GAR1Q9NY12 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GAR1Q9NY12 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
GAR1Q9NY12 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
GAR1Q9NY12 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.05■□□□□ 0.64
GAR1Q9NY12 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GAR1Q9NY12 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GAR1Q9NY12 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GAR1Q9NY12 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GAR1Q9NY12 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GAR1Q9NY12 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GAR1Q9NY12 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GAR1Q9NY12 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GAR1Q9NY12 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GAR1Q9NY12 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.04■□□□□ 0.64
GAR1Q9NY12 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
GAR1Q9NY12 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
GAR1Q9NY12 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.04■□□□□ 0.64
GAR1Q9NY12 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.04■□□□□ 0.64
GAR1Q9NY12 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
GAR1Q9NY12 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
GAR1Q9NY12 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GAR1Q9NY12 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
GAR1Q9NY12 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GAR1Q9NY12 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
GAR1Q9NY12 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
GAR1Q9NY12 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
GAR1Q9NY12 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GAR1Q9NY12 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GAR1Q9NY12 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms