Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.27■■□□□ 1
PARPBPQ9NWS1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.27■■□□□ 1
PARPBPQ9NWS1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.27■■□□□ 1
PARPBPQ9NWS1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.27■■□□□ 1
PARPBPQ9NWS1 AC010501.1-201ENST00000606270 1962 ntBASIC21.27■□□□□ 0.99
PARPBPQ9NWS1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.26■□□□□ 0.99
PARPBPQ9NWS1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.26■□□□□ 0.99
PARPBPQ9NWS1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PARPBPQ9NWS1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PARPBPQ9NWS1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PARPBPQ9NWS1 AC145676.1-201ENST00000514988 2004 ntBASIC21.26■□□□□ 0.99
PARPBPQ9NWS1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.26■□□□□ 0.99
PARPBPQ9NWS1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.26■□□□□ 0.99
PARPBPQ9NWS1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PARPBPQ9NWS1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PARPBPQ9NWS1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.25■□□□□ 0.99
PARPBPQ9NWS1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PARPBPQ9NWS1 DUX4L18-201ENST00000553347 1267 ntBASIC21.25■□□□□ 0.99
PARPBPQ9NWS1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.25■□□□□ 0.99
PARPBPQ9NWS1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.25■□□□□ 0.99
PARPBPQ9NWS1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PARPBPQ9NWS1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PARPBPQ9NWS1 AC091060.1-201ENST00000623524 1766 ntBASIC21.25■□□□□ 0.99
PARPBPQ9NWS1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PARPBPQ9NWS1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PARPBPQ9NWS1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.24■□□□□ 0.99
PARPBPQ9NWS1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PARPBPQ9NWS1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PARPBPQ9NWS1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PARPBPQ9NWS1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PARPBPQ9NWS1 AL033527.3-201ENST00000566366 1196 ntBASIC21.23■□□□□ 0.99
PARPBPQ9NWS1 ERN1-208ENST00000606895 2068 ntBASIC21.23■□□□□ 0.99
PARPBPQ9NWS1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PARPBPQ9NWS1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PARPBPQ9NWS1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
PARPBPQ9NWS1 DUSP8P4-201ENST00000399538 1761 ntBASIC21.23■□□□□ 0.99
PARPBPQ9NWS1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PARPBPQ9NWS1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PARPBPQ9NWS1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
PARPBPQ9NWS1 RPS2P7-201ENST00000447334 885 ntBASIC21.22■□□□□ 0.99
PARPBPQ9NWS1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.22■□□□□ 0.99
PARPBPQ9NWS1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PARPBPQ9NWS1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PARPBPQ9NWS1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PARPBPQ9NWS1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.21■□□□□ 0.99
PARPBPQ9NWS1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PARPBPQ9NWS1 AC139795.1-202ENST00000500444 432 ntBASIC21.21■□□□□ 0.99
PARPBPQ9NWS1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.21■□□□□ 0.99
PARPBPQ9NWS1 AC074183.2-201ENST00000623112 922 ntBASIC21.21■□□□□ 0.99
PARPBPQ9NWS1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.21■□□□□ 0.99
PARPBPQ9NWS1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PARPBPQ9NWS1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
PARPBPQ9NWS1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.2■□□□□ 0.98
PARPBPQ9NWS1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PARPBPQ9NWS1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.2■□□□□ 0.98
PARPBPQ9NWS1 AC087393.1-201ENST00000582896 145 ntBASIC21.2■□□□□ 0.98
PARPBPQ9NWS1 BHLHE23-202ENST00000612929 1109 ntBASIC21.2■□□□□ 0.98
PARPBPQ9NWS1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PARPBPQ9NWS1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PARPBPQ9NWS1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PARPBPQ9NWS1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PARPBPQ9NWS1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PARPBPQ9NWS1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PARPBPQ9NWS1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PARPBPQ9NWS1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
PARPBPQ9NWS1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.19■□□□□ 0.98
PARPBPQ9NWS1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PARPBPQ9NWS1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PARPBPQ9NWS1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.18■□□□□ 0.98
PARPBPQ9NWS1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
PARPBPQ9NWS1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PARPBPQ9NWS1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PARPBPQ9NWS1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.18■□□□□ 0.98
PARPBPQ9NWS1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.18■□□□□ 0.98
PARPBPQ9NWS1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.18■□□□□ 0.98
PARPBPQ9NWS1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PARPBPQ9NWS1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PARPBPQ9NWS1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
PARPBPQ9NWS1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PARPBPQ9NWS1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.17■□□□□ 0.98
PARPBPQ9NWS1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PARPBPQ9NWS1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PARPBPQ9NWS1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.17■□□□□ 0.98
PARPBPQ9NWS1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PARPBPQ9NWS1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PARPBPQ9NWS1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PARPBPQ9NWS1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PARPBPQ9NWS1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.16■□□□□ 0.98
PARPBPQ9NWS1 AC096887.2-201ENST00000623443 1957 ntBASIC21.16■□□□□ 0.98
PARPBPQ9NWS1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
PARPBPQ9NWS1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PARPBPQ9NWS1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.15■□□□□ 0.98
PARPBPQ9NWS1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PARPBPQ9NWS1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PARPBPQ9NWS1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PARPBPQ9NWS1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PARPBPQ9NWS1 AC097639.1-201ENST00000565519 1891 ntBASIC21.15■□□□□ 0.98
PARPBPQ9NWS1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PARPBPQ9NWS1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.14■□□□□ 0.98
PARPBPQ9NWS1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms