Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC34.88■■■■□ 3.17
SLC52A1Q9NWF4 AC142472.1-201ENST00000612013 1741 ntBASIC34.88■■■■□ 3.17
SLC52A1Q9NWF4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
SLC52A1Q9NWF4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
SLC52A1Q9NWF4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
SLC52A1Q9NWF4 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC34.87■■■■□ 3.17
SLC52A1Q9NWF4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
SLC52A1Q9NWF4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
SLC52A1Q9NWF4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
SLC52A1Q9NWF4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC34.87■■■■□ 3.17
SLC52A1Q9NWF4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC34.87■■■■□ 3.17
SLC52A1Q9NWF4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC34.86■■■■□ 3.17
SLC52A1Q9NWF4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC34.86■■■■□ 3.17
SLC52A1Q9NWF4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC34.86■■■■□ 3.17
SLC52A1Q9NWF4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
SLC52A1Q9NWF4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC34.85■■■■□ 3.17
SLC52A1Q9NWF4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
SLC52A1Q9NWF4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC34.85■■■■□ 3.17
SLC52A1Q9NWF4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC34.85■■■■□ 3.17
SLC52A1Q9NWF4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC34.85■■■■□ 3.17
SLC52A1Q9NWF4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC34.85■■■■□ 3.17
SLC52A1Q9NWF4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
SLC52A1Q9NWF4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC34.84■■■■□ 3.17
SLC52A1Q9NWF4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
SLC52A1Q9NWF4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
SLC52A1Q9NWF4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC34.84■■■■□ 3.17
SLC52A1Q9NWF4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC34.83■■■■□ 3.17
SLC52A1Q9NWF4 SRR-208ENST00000576848 588 ntTSL 4 BASIC34.83■■■■□ 3.17
SLC52A1Q9NWF4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC34.82■■■■□ 3.16
SLC52A1Q9NWF4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC34.82■■■■□ 3.16
SLC52A1Q9NWF4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC34.82■■■■□ 3.16
SLC52A1Q9NWF4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC34.81■■■■□ 3.16
SLC52A1Q9NWF4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC34.81■■■■□ 3.16
SLC52A1Q9NWF4 MIR3621-201ENST00000580529 85 ntBASIC34.81■■■■□ 3.16
SLC52A1Q9NWF4 AL117332.1-201ENST00000622628 974 ntBASIC34.81■■■■□ 3.16
SLC52A1Q9NWF4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
SLC52A1Q9NWF4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC34.8■■■■□ 3.16
SLC52A1Q9NWF4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
SLC52A1Q9NWF4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
SLC52A1Q9NWF4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC34.79■■■■□ 3.16
SLC52A1Q9NWF4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC34.79■■■■□ 3.16
SLC52A1Q9NWF4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC34.79■■■■□ 3.16
SLC52A1Q9NWF4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
SLC52A1Q9NWF4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
SLC52A1Q9NWF4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
SLC52A1Q9NWF4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC34.78■■■■□ 3.16
SLC52A1Q9NWF4 RALB-208ENST00000631312 311 ntTSL 5 BASIC34.78■■■■□ 3.16
SLC52A1Q9NWF4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC34.78■■■■□ 3.16
SLC52A1Q9NWF4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC34.78■■■■□ 3.16
SLC52A1Q9NWF4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
SLC52A1Q9NWF4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
SLC52A1Q9NWF4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC34.77■■■■□ 3.16
SLC52A1Q9NWF4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC34.77■■■■□ 3.16
SLC52A1Q9NWF4 AC010997.5-201ENST00000609182 354 ntBASIC34.77■■■■□ 3.16
SLC52A1Q9NWF4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC34.76■■■■□ 3.16
SLC52A1Q9NWF4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC34.76■■■■□ 3.16
SLC52A1Q9NWF4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC34.76■■■■□ 3.16
SLC52A1Q9NWF4 AC011551.1-201ENST00000614101 683 ntBASIC34.76■■■■□ 3.16
SLC52A1Q9NWF4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC34.76■■■■□ 3.15
SLC52A1Q9NWF4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC34.76■■■■□ 3.15
SLC52A1Q9NWF4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC34.75■■■■□ 3.15
SLC52A1Q9NWF4 AL136116.3-201ENST00000402907 1138 ntBASIC34.75■■■■□ 3.15
SLC52A1Q9NWF4 MIR6724-1-201ENST00000616420 92 ntBASIC34.75■■■■□ 3.15
SLC52A1Q9NWF4 MIR6724-2-201ENST00000616483 92 ntBASIC34.75■■■■□ 3.15
SLC52A1Q9NWF4 MIR6724-4-201ENST00000617390 92 ntBASIC34.75■■■■□ 3.15
SLC52A1Q9NWF4 MIR6724-3-201ENST00000622482 92 ntBASIC34.75■■■■□ 3.15
SLC52A1Q9NWF4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC34.74■■■■□ 3.15
SLC52A1Q9NWF4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC34.74■■■■□ 3.15
SLC52A1Q9NWF4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC34.74■■■■□ 3.15
SLC52A1Q9NWF4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC34.74■■■■□ 3.15
SLC52A1Q9NWF4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
SLC52A1Q9NWF4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC34.73■■■■□ 3.15
SLC52A1Q9NWF4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
SLC52A1Q9NWF4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC34.73■■■■□ 3.15
SLC52A1Q9NWF4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC34.73■■■■□ 3.15
SLC52A1Q9NWF4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
SLC52A1Q9NWF4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC34.72■■■■□ 3.15
SLC52A1Q9NWF4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC34.72■■■■□ 3.15
SLC52A1Q9NWF4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC34.72■■■■□ 3.15
SLC52A1Q9NWF4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
SLC52A1Q9NWF4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC34.72■■■■□ 3.15
SLC52A1Q9NWF4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC34.72■■■■□ 3.15
SLC52A1Q9NWF4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC34.72■■■■□ 3.15
SLC52A1Q9NWF4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
SLC52A1Q9NWF4 ST7-202ENST00000323984 2142 ntTSL 5 BASIC34.72■■■■□ 3.15
SLC52A1Q9NWF4 ST7-207ENST00000393449 2127 ntTSL 5 BASIC34.72■■■■□ 3.15
SLC52A1Q9NWF4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC34.71■■■■□ 3.15
SLC52A1Q9NWF4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
SLC52A1Q9NWF4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC34.71■■■■□ 3.15
SLC52A1Q9NWF4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC34.71■■■■□ 3.15
SLC52A1Q9NWF4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC34.71■■■■□ 3.15
SLC52A1Q9NWF4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC34.71■■■■□ 3.15
SLC52A1Q9NWF4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
SLC52A1Q9NWF4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC34.71■■■■□ 3.15
SLC52A1Q9NWF4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
SLC52A1Q9NWF4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
SLC52A1Q9NWF4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC34.7■■■■□ 3.14
SLC52A1Q9NWF4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC34.69■■■■□ 3.14
SLC52A1Q9NWF4 AC110285.6-201ENST00000617652 491 ntBASIC34.69■■■■□ 3.14
SLC52A1Q9NWF4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC34.69■■■■□ 3.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms