Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
C12orf4Q9NQ89 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
C12orf4Q9NQ89 ERN1-208ENST00000606895 2068 ntBASIC20.47■□□□□ 0.87
C12orf4Q9NQ89 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.47■□□□□ 0.87
C12orf4Q9NQ89 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
C12orf4Q9NQ89 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
C12orf4Q9NQ89 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.46■□□□□ 0.87
C12orf4Q9NQ89 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.46■□□□□ 0.87
C12orf4Q9NQ89 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
C12orf4Q9NQ89 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
C12orf4Q9NQ89 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.46■□□□□ 0.87
C12orf4Q9NQ89 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
C12orf4Q9NQ89 AC008813.1-201ENST00000536597 885 ntBASIC20.45■□□□□ 0.86
C12orf4Q9NQ89 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.45■□□□□ 0.86
C12orf4Q9NQ89 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
C12orf4Q9NQ89 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
C12orf4Q9NQ89 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.45■□□□□ 0.86
C12orf4Q9NQ89 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
C12orf4Q9NQ89 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
C12orf4Q9NQ89 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
C12orf4Q9NQ89 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.44■□□□□ 0.86
C12orf4Q9NQ89 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
C12orf4Q9NQ89 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
C12orf4Q9NQ89 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
C12orf4Q9NQ89 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.43■□□□□ 0.86
C12orf4Q9NQ89 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
C12orf4Q9NQ89 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
C12orf4Q9NQ89 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
C12orf4Q9NQ89 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.42■□□□□ 0.86
C12orf4Q9NQ89 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.42■□□□□ 0.86
C12orf4Q9NQ89 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.42■□□□□ 0.86
C12orf4Q9NQ89 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.42■□□□□ 0.86
C12orf4Q9NQ89 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.42■□□□□ 0.86
C12orf4Q9NQ89 DUX4L13-201ENST00000554103 1267 ntBASIC20.42■□□□□ 0.86
C12orf4Q9NQ89 DUX4L15-201ENST00000611059 1267 ntBASIC20.42■□□□□ 0.86
C12orf4Q9NQ89 DUX4L23-201ENST00000615195 1269 ntBASIC20.42■□□□□ 0.86
C12orf4Q9NQ89 DUX4L24-201ENST00000617576 1269 ntBASIC20.42■□□□□ 0.86
C12orf4Q9NQ89 DUX4L22-201ENST00000618238 1269 ntBASIC20.42■□□□□ 0.86
C12orf4Q9NQ89 DUX4L20-201ENST00000619712 1269 ntBASIC20.42■□□□□ 0.86
C12orf4Q9NQ89 DUX4L21-201ENST00000622058 1269 ntBASIC20.42■□□□□ 0.86
C12orf4Q9NQ89 DUX4L10-201ENST00000622460 1267 ntBASIC20.42■□□□□ 0.86
C12orf4Q9NQ89 DUX4L25-201ENST00000624915 1269 ntBASIC20.42■□□□□ 0.86
C12orf4Q9NQ89 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.42■□□□□ 0.86
C12orf4Q9NQ89 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
C12orf4Q9NQ89 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
C12orf4Q9NQ89 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
C12orf4Q9NQ89 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
C12orf4Q9NQ89 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
C12orf4Q9NQ89 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C12orf4Q9NQ89 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C12orf4Q9NQ89 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
C12orf4Q9NQ89 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.41■□□□□ 0.86
C12orf4Q9NQ89 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.41■□□□□ 0.86
C12orf4Q9NQ89 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C12orf4Q9NQ89 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
C12orf4Q9NQ89 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C12orf4Q9NQ89 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
C12orf4Q9NQ89 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
C12orf4Q9NQ89 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.4■□□□□ 0.86
C12orf4Q9NQ89 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
C12orf4Q9NQ89 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
C12orf4Q9NQ89 MIR219A2-201ENST00000608502 1504 ntBASIC20.39■□□□□ 0.85
C12orf4Q9NQ89 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
C12orf4Q9NQ89 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
C12orf4Q9NQ89 AC148477.6-201ENST00000623746 465 ntBASIC20.39■□□□□ 0.85
C12orf4Q9NQ89 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
C12orf4Q9NQ89 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.39■□□□□ 0.85
C12orf4Q9NQ89 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.39■□□□□ 0.85
C12orf4Q9NQ89 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
C12orf4Q9NQ89 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
C12orf4Q9NQ89 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
C12orf4Q9NQ89 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
C12orf4Q9NQ89 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
C12orf4Q9NQ89 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
C12orf4Q9NQ89 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
C12orf4Q9NQ89 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
C12orf4Q9NQ89 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
C12orf4Q9NQ89 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
C12orf4Q9NQ89 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.37■□□□□ 0.85
C12orf4Q9NQ89 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
C12orf4Q9NQ89 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
C12orf4Q9NQ89 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
C12orf4Q9NQ89 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
C12orf4Q9NQ89 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
C12orf4Q9NQ89 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
C12orf4Q9NQ89 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C12orf4Q9NQ89 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C12orf4Q9NQ89 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
C12orf4Q9NQ89 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C12orf4Q9NQ89 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
C12orf4Q9NQ89 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C12orf4Q9NQ89 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C12orf4Q9NQ89 AC142381.3-201ENST00000568208 1670 ntBASIC20.35■□□□□ 0.85
C12orf4Q9NQ89 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.35■□□□□ 0.85
C12orf4Q9NQ89 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.35■□□□□ 0.85
C12orf4Q9NQ89 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
C12orf4Q9NQ89 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
C12orf4Q9NQ89 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
C12orf4Q9NQ89 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
C12orf4Q9NQ89 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms