Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC29.31■■■□□ 2.28
VPS33BQ9H267 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC29.31■■■□□ 2.28
VPS33BQ9H267 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC29.31■■■□□ 2.28
VPS33BQ9H267 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC29.31■■■□□ 2.28
VPS33BQ9H267 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
VPS33BQ9H267 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
VPS33BQ9H267 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
VPS33BQ9H267 BX255925.1-201ENST00000566954 1854 ntBASIC29.31■■■□□ 2.28
VPS33BQ9H267 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.31■■■□□ 2.28
VPS33BQ9H267 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
VPS33BQ9H267 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC29.3■■■□□ 2.28
VPS33BQ9H267 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
VPS33BQ9H267 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
VPS33BQ9H267 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
VPS33BQ9H267 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
VPS33BQ9H267 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
VPS33BQ9H267 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC29.29■■■□□ 2.28
VPS33BQ9H267 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
VPS33BQ9H267 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
VPS33BQ9H267 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
VPS33BQ9H267 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
VPS33BQ9H267 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
VPS33BQ9H267 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC29.28■■■□□ 2.28
VPS33BQ9H267 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
VPS33BQ9H267 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC29.27■■■□□ 2.28
VPS33BQ9H267 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
VPS33BQ9H267 AC133561.4-201ENST00000566112 224 ntBASIC29.27■■■□□ 2.28
VPS33BQ9H267 AC011551.1-201ENST00000614101 683 ntBASIC29.27■■■□□ 2.28
VPS33BQ9H267 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
VPS33BQ9H267 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC29.27■■■□□ 2.28
VPS33BQ9H267 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
VPS33BQ9H267 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC29.26■■■□□ 2.27
VPS33BQ9H267 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC29.26■■■□□ 2.27
VPS33BQ9H267 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC29.26■■■□□ 2.27
VPS33BQ9H267 AL356740.2-201ENST00000601559 647 ntBASIC29.26■■■□□ 2.27
VPS33BQ9H267 AC110285.6-201ENST00000617652 491 ntBASIC29.26■■■□□ 2.27
VPS33BQ9H267 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC29.26■■■□□ 2.27
VPS33BQ9H267 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
VPS33BQ9H267 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
VPS33BQ9H267 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC29.25■■■□□ 2.27
VPS33BQ9H267 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC29.25■■■□□ 2.27
VPS33BQ9H267 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
VPS33BQ9H267 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC29.25■■■□□ 2.27
VPS33BQ9H267 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC29.24■■■□□ 2.27
VPS33BQ9H267 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC29.24■■■□□ 2.27
VPS33BQ9H267 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC29.24■■■□□ 2.27
VPS33BQ9H267 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC29.24■■■□□ 2.27
VPS33BQ9H267 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC29.24■■■□□ 2.27
VPS33BQ9H267 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
VPS33BQ9H267 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
VPS33BQ9H267 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC29.23■■■□□ 2.27
VPS33BQ9H267 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
VPS33BQ9H267 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
VPS33BQ9H267 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC29.23■■■□□ 2.27
VPS33BQ9H267 MTDHP2-201ENST00000601468 714 ntBASIC29.23■■■□□ 2.27
VPS33BQ9H267 AC005837.3-201ENST00000612163 286 ntBASIC29.23■■■□□ 2.27
VPS33BQ9H267 EXOG-217ENST00000630638 197 ntTSL 5 BASIC29.23■■■□□ 2.27
VPS33BQ9H267 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC29.23■■■□□ 2.27
VPS33BQ9H267 AC142472.1-201ENST00000612013 1741 ntBASIC29.23■■■□□ 2.27
VPS33BQ9H267 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC29.22■■■□□ 2.27
VPS33BQ9H267 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
VPS33BQ9H267 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
VPS33BQ9H267 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC29.22■■■□□ 2.27
VPS33BQ9H267 LSM4-201ENST00000252816 986 ntTSL 2 BASIC29.21■■■□□ 2.27
VPS33BQ9H267 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
VPS33BQ9H267 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
VPS33BQ9H267 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
VPS33BQ9H267 ABCB10P1-201ENST00000614297 2181 ntBASIC29.2■■■□□ 2.27
VPS33BQ9H267 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC29.2■■■□□ 2.27
VPS33BQ9H267 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.27
VPS33BQ9H267 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
VPS33BQ9H267 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
VPS33BQ9H267 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC29.2■■■□□ 2.26
VPS33BQ9H267 LINC01003-201ENST00000564834 1764 ntBASIC29.2■■■□□ 2.26
VPS33BQ9H267 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
VPS33BQ9H267 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC29.19■■■□□ 2.26
VPS33BQ9H267 SENP5-202ENST00000419026 973 ntTSL 3 BASIC29.19■■■□□ 2.26
VPS33BQ9H267 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC29.19■■■□□ 2.26
VPS33BQ9H267 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC29.18■■■□□ 2.26
VPS33BQ9H267 TK2-202ENST00000417693 1046 ntTSL 2 BASIC29.18■■■□□ 2.26
VPS33BQ9H267 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC29.18■■■□□ 2.26
VPS33BQ9H267 GAK-223ENST00000628912 497 ntTSL 5 BASIC29.18■■■□□ 2.26
VPS33BQ9H267 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
VPS33BQ9H267 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC29.17■■■□□ 2.26
VPS33BQ9H267 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
VPS33BQ9H267 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
VPS33BQ9H267 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
VPS33BQ9H267 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
VPS33BQ9H267 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
VPS33BQ9H267 MIR4466-201ENST00000606121 54 ntBASIC29.16■■■□□ 2.26
VPS33BQ9H267 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
VPS33BQ9H267 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
VPS33BQ9H267 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC29.15■■■□□ 2.26
VPS33BQ9H267 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
VPS33BQ9H267 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC29.15■■■□□ 2.26
VPS33BQ9H267 AC096631.2-201ENST00000436136 790 ntBASIC29.14■■■□□ 2.26
VPS33BQ9H267 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC29.14■■■□□ 2.26
VPS33BQ9H267 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
VPS33BQ9H267 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
VPS33BQ9H267 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms