Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC29.31■■■□□ 2.28
VPS33BQ9H267 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC29.31■■■□□ 2.28
VPS33BQ9H267 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC29.31■■■□□ 2.28
VPS33BQ9H267 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC29.31■■■□□ 2.28
VPS33BQ9H267 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
VPS33BQ9H267 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
VPS33BQ9H267 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
VPS33BQ9H267 BX255925.1-201ENST00000566954 1854 ntBASIC29.31■■■□□ 2.28
VPS33BQ9H267 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.31■■■□□ 2.28
VPS33BQ9H267 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
VPS33BQ9H267 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC29.3■■■□□ 2.28
VPS33BQ9H267 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
VPS33BQ9H267 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
VPS33BQ9H267 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
VPS33BQ9H267 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
VPS33BQ9H267 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
VPS33BQ9H267 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC29.29■■■□□ 2.28
VPS33BQ9H267 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
VPS33BQ9H267 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
VPS33BQ9H267 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
VPS33BQ9H267 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
VPS33BQ9H267 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
VPS33BQ9H267 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC29.28■■■□□ 2.28
VPS33BQ9H267 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
VPS33BQ9H267 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC29.27■■■□□ 2.28
VPS33BQ9H267 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
VPS33BQ9H267 AC133561.4-201ENST00000566112 224 ntBASIC29.27■■■□□ 2.28
VPS33BQ9H267 AC011551.1-201ENST00000614101 683 ntBASIC29.27■■■□□ 2.28
VPS33BQ9H267 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
VPS33BQ9H267 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC29.27■■■□□ 2.28
VPS33BQ9H267 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
VPS33BQ9H267 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC29.26■■■□□ 2.27
VPS33BQ9H267 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC29.26■■■□□ 2.27
VPS33BQ9H267 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC29.26■■■□□ 2.27
VPS33BQ9H267 AL356740.2-201ENST00000601559 647 ntBASIC29.26■■■□□ 2.27
VPS33BQ9H267 AC110285.6-201ENST00000617652 491 ntBASIC29.26■■■□□ 2.27
VPS33BQ9H267 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC29.26■■■□□ 2.27
VPS33BQ9H267 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
VPS33BQ9H267 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
VPS33BQ9H267 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC29.25■■■□□ 2.27
VPS33BQ9H267 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC29.25■■■□□ 2.27
VPS33BQ9H267 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
VPS33BQ9H267 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC29.25■■■□□ 2.27
VPS33BQ9H267 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC29.24■■■□□ 2.27
VPS33BQ9H267 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC29.24■■■□□ 2.27
VPS33BQ9H267 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC29.24■■■□□ 2.27
VPS33BQ9H267 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC29.24■■■□□ 2.27
VPS33BQ9H267 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC29.24■■■□□ 2.27
VPS33BQ9H267 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
VPS33BQ9H267 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
VPS33BQ9H267 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC29.23■■■□□ 2.27
VPS33BQ9H267 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
VPS33BQ9H267 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
VPS33BQ9H267 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC29.23■■■□□ 2.27
VPS33BQ9H267 MTDHP2-201ENST00000601468 714 ntBASIC29.23■■■□□ 2.27
VPS33BQ9H267 AC005837.3-201ENST00000612163 286 ntBASIC29.23■■■□□ 2.27
VPS33BQ9H267 EXOG-217ENST00000630638 197 ntTSL 5 BASIC29.23■■■□□ 2.27
VPS33BQ9H267 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC29.23■■■□□ 2.27
VPS33BQ9H267 AC142472.1-201ENST00000612013 1741 ntBASIC29.23■■■□□ 2.27
VPS33BQ9H267 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC29.22■■■□□ 2.27
VPS33BQ9H267 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
VPS33BQ9H267 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
VPS33BQ9H267 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC29.22■■■□□ 2.27
VPS33BQ9H267 LSM4-201ENST00000252816 986 ntTSL 2 BASIC29.21■■■□□ 2.27
VPS33BQ9H267 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
VPS33BQ9H267 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
VPS33BQ9H267 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
VPS33BQ9H267 ABCB10P1-201ENST00000614297 2181 ntBASIC29.2■■■□□ 2.27
VPS33BQ9H267 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC29.2■■■□□ 2.27
VPS33BQ9H267 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.27
VPS33BQ9H267 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
VPS33BQ9H267 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
VPS33BQ9H267 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC29.2■■■□□ 2.26
VPS33BQ9H267 LINC01003-201ENST00000564834 1764 ntBASIC29.2■■■□□ 2.26
VPS33BQ9H267 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
VPS33BQ9H267 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC29.19■■■□□ 2.26
VPS33BQ9H267 SENP5-202ENST00000419026 973 ntTSL 3 BASIC29.19■■■□□ 2.26
VPS33BQ9H267 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC29.19■■■□□ 2.26
VPS33BQ9H267 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC29.18■■■□□ 2.26
VPS33BQ9H267 TK2-202ENST00000417693 1046 ntTSL 2 BASIC29.18■■■□□ 2.26
VPS33BQ9H267 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC29.18■■■□□ 2.26
VPS33BQ9H267 GAK-223ENST00000628912 497 ntTSL 5 BASIC29.18■■■□□ 2.26
VPS33BQ9H267 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
VPS33BQ9H267 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC29.17■■■□□ 2.26
VPS33BQ9H267 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
VPS33BQ9H267 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
VPS33BQ9H267 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
VPS33BQ9H267 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
VPS33BQ9H267 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
VPS33BQ9H267 MIR4466-201ENST00000606121 54 ntBASIC29.16■■■□□ 2.26
VPS33BQ9H267 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
VPS33BQ9H267 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
VPS33BQ9H267 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC29.15■■■□□ 2.26
VPS33BQ9H267 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
VPS33BQ9H267 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC29.15■■■□□ 2.26
VPS33BQ9H267 AC096631.2-201ENST00000436136 790 ntBASIC29.14■■■□□ 2.26
VPS33BQ9H267 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC29.14■■■□□ 2.26
VPS33BQ9H267 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
VPS33BQ9H267 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
VPS33BQ9H267 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms