Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCC1Q96S66 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCC1Q96S66 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCC1Q96S66 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCC1Q96S66 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCC1Q96S66 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.85■□□□□ 0.77
CLCC1Q96S66 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCC1Q96S66 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCC1Q96S66 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCC1Q96S66 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCC1Q96S66 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCC1Q96S66 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.84■□□□□ 0.77
CLCC1Q96S66 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.84■□□□□ 0.77
CLCC1Q96S66 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCC1Q96S66 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCC1Q96S66 MIR219A2-201ENST00000608502 1504 ntBASIC19.83■□□□□ 0.77
CLCC1Q96S66 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLCC1Q96S66 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLCC1Q96S66 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.83■□□□□ 0.77
CLCC1Q96S66 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLCC1Q96S66 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLCC1Q96S66 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLCC1Q96S66 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLCC1Q96S66 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLCC1Q96S66 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.82■□□□□ 0.76
CLCC1Q96S66 WHAMMP3-201ENST00000611636 1609 ntBASIC19.82■□□□□ 0.76
CLCC1Q96S66 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.82■□□□□ 0.76
CLCC1Q96S66 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.82■□□□□ 0.76
CLCC1Q96S66 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.81■□□□□ 0.76
CLCC1Q96S66 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CLCC1Q96S66 AC012676.1-201ENST00000574705 1949 ntBASIC19.81■□□□□ 0.76
CLCC1Q96S66 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCC1Q96S66 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.81■□□□□ 0.76
CLCC1Q96S66 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLCC1Q96S66 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.81■□□□□ 0.76
CLCC1Q96S66 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCC1Q96S66 LINC00543-201ENST00000567234 1845 ntBASIC19.81■□□□□ 0.76
CLCC1Q96S66 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CLCC1Q96S66 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLCC1Q96S66 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCC1Q96S66 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCC1Q96S66 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CLCC1Q96S66 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCC1Q96S66 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLCC1Q96S66 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCC1Q96S66 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CLCC1Q96S66 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCC1Q96S66 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCC1Q96S66 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCC1Q96S66 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCC1Q96S66 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.79■□□□□ 0.76
CLCC1Q96S66 AC142472.1-201ENST00000612013 1741 ntBASIC19.79■□□□□ 0.76
CLCC1Q96S66 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCC1Q96S66 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCC1Q96S66 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCC1Q96S66 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CLCC1Q96S66 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCC1Q96S66 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.79■□□□□ 0.76
CLCC1Q96S66 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CLCC1Q96S66 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CLCC1Q96S66 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.79■□□□□ 0.76
CLCC1Q96S66 CLDN5-201ENST00000403084 2357 ntBASIC19.79■□□□□ 0.76
CLCC1Q96S66 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.79■□□□□ 0.76
CLCC1Q96S66 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLCC1Q96S66 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLCC1Q96S66 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.78■□□□□ 0.76
CLCC1Q96S66 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLCC1Q96S66 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.78■□□□□ 0.76
CLCC1Q96S66 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLCC1Q96S66 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CLCC1Q96S66 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.77■□□□□ 0.76
CLCC1Q96S66 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLCC1Q96S66 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.77■□□□□ 0.76
CLCC1Q96S66 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CLCC1Q96S66 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLCC1Q96S66 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLCC1Q96S66 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.77■□□□□ 0.76
CLCC1Q96S66 AC148477.6-201ENST00000623746 465 ntBASIC19.77■□□□□ 0.76
CLCC1Q96S66 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLCC1Q96S66 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLCC1Q96S66 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.75
CLCC1Q96S66 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.77■□□□□ 0.75
CLCC1Q96S66 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLCC1Q96S66 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLCC1Q96S66 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CLCC1Q96S66 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCC1Q96S66 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCC1Q96S66 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CLCC1Q96S66 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCC1Q96S66 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CLCC1Q96S66 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCC1Q96S66 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCC1Q96S66 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCC1Q96S66 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLCC1Q96S66 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLCC1Q96S66 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCC1Q96S66 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.75■□□□□ 0.75
CLCC1Q96S66 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCC1Q96S66 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLCC1Q96S66 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms