Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TIMD4Q96H15 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TIMD4Q96H15 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.06■□□□□ 0.8
TIMD4Q96H15 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TIMD4Q96H15 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
TIMD4Q96H15 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TIMD4Q96H15 AL031848.2-201ENST00000607670 837 ntBASIC20.05■□□□□ 0.8
TIMD4Q96H15 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TIMD4Q96H15 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TIMD4Q96H15 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TIMD4Q96H15 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TIMD4Q96H15 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.05■□□□□ 0.8
TIMD4Q96H15 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TIMD4Q96H15 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.04■□□□□ 0.8
TIMD4Q96H15 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TIMD4Q96H15 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TIMD4Q96H15 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.04■□□□□ 0.8
TIMD4Q96H15 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.04■□□□□ 0.8
TIMD4Q96H15 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.04■□□□□ 0.8
TIMD4Q96H15 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.04■□□□□ 0.8
TIMD4Q96H15 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TIMD4Q96H15 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TIMD4Q96H15 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.04■□□□□ 0.8
TIMD4Q96H15 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.03■□□□□ 0.8
TIMD4Q96H15 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TIMD4Q96H15 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TIMD4Q96H15 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TIMD4Q96H15 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TIMD4Q96H15 AL451085.2-201ENST00000605085 799 ntBASIC20.03■□□□□ 0.8
TIMD4Q96H15 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TIMD4Q96H15 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TIMD4Q96H15 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TIMD4Q96H15 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TIMD4Q96H15 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TIMD4Q96H15 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.02■□□□□ 0.8
TIMD4Q96H15 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TIMD4Q96H15 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TIMD4Q96H15 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
TIMD4Q96H15 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TIMD4Q96H15 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TIMD4Q96H15 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TIMD4Q96H15 AC103724.3-201ENST00000564481 992 ntBASIC20.01■□□□□ 0.79
TIMD4Q96H15 AL035685.1-201ENST00000636663 812 ntBASIC20.01■□□□□ 0.79
TIMD4Q96H15 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TIMD4Q96H15 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20■□□□□ 0.79
TIMD4Q96H15 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20■□□□□ 0.79
TIMD4Q96H15 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20■□□□□ 0.79
TIMD4Q96H15 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TIMD4Q96H15 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TIMD4Q96H15 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TIMD4Q96H15 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TIMD4Q96H15 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TIMD4Q96H15 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.99■□□□□ 0.79
TIMD4Q96H15 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TIMD4Q96H15 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TIMD4Q96H15 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.99■□□□□ 0.79
TIMD4Q96H15 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TIMD4Q96H15 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TIMD4Q96H15 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TIMD4Q96H15 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.98■□□□□ 0.79
TIMD4Q96H15 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.98■□□□□ 0.79
TIMD4Q96H15 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TIMD4Q96H15 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TIMD4Q96H15 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.98■□□□□ 0.79
TIMD4Q96H15 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TIMD4Q96H15 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TIMD4Q96H15 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TIMD4Q96H15 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TIMD4Q96H15 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TIMD4Q96H15 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.98■□□□□ 0.79
TIMD4Q96H15 AL592295.1-201ENST00000400984 884 ntBASIC19.97■□□□□ 0.79
TIMD4Q96H15 AC009299.2-201ENST00000482477 511 ntBASIC19.97■□□□□ 0.79
TIMD4Q96H15 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.97■□□□□ 0.79
TIMD4Q96H15 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TIMD4Q96H15 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TIMD4Q96H15 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TIMD4Q96H15 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TIMD4Q96H15 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.97■□□□□ 0.79
TIMD4Q96H15 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.96■□□□□ 0.79
TIMD4Q96H15 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TIMD4Q96H15 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TIMD4Q96H15 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TIMD4Q96H15 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.96■□□□□ 0.79
TIMD4Q96H15 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TIMD4Q96H15 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TIMD4Q96H15 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TIMD4Q96H15 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TIMD4Q96H15 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TIMD4Q96H15 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TIMD4Q96H15 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.95■□□□□ 0.78
TIMD4Q96H15 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TIMD4Q96H15 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TIMD4Q96H15 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TIMD4Q96H15 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.94■□□□□ 0.78
TIMD4Q96H15 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TIMD4Q96H15 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TIMD4Q96H15 THA1P-201ENST00000590384 1145 ntBASIC19.94■□□□□ 0.78
TIMD4Q96H15 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TIMD4Q96H15 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.94■□□□□ 0.78
TIMD4Q96H15 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms