Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.68■■□□□ 1.38
PTCD3Q96EY7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.68■■□□□ 1.38
PTCD3Q96EY7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PTCD3Q96EY7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
PTCD3Q96EY7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.67■■□□□ 1.38
PTCD3Q96EY7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
PTCD3Q96EY7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PTCD3Q96EY7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PTCD3Q96EY7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTCD3Q96EY7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTCD3Q96EY7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.65■■□□□ 1.38
PTCD3Q96EY7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
PTCD3Q96EY7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PTCD3Q96EY7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PTCD3Q96EY7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PTCD3Q96EY7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PTCD3Q96EY7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PTCD3Q96EY7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PTCD3Q96EY7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PTCD3Q96EY7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.63■■□□□ 1.37
PTCD3Q96EY7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTCD3Q96EY7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.63■■□□□ 1.37
PTCD3Q96EY7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PTCD3Q96EY7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTCD3Q96EY7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.63■■□□□ 1.37
PTCD3Q96EY7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.63■■□□□ 1.37
PTCD3Q96EY7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTCD3Q96EY7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.62■■□□□ 1.37
PTCD3Q96EY7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PTCD3Q96EY7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PTCD3Q96EY7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PTCD3Q96EY7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.62■■□□□ 1.37
PTCD3Q96EY7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
PTCD3Q96EY7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PTCD3Q96EY7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PTCD3Q96EY7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.61■■□□□ 1.37
PTCD3Q96EY7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.61■■□□□ 1.37
PTCD3Q96EY7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PTCD3Q96EY7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PTCD3Q96EY7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.61■■□□□ 1.37
PTCD3Q96EY7 AL359504.2-201ENST00000605506 1601 ntBASIC23.61■■□□□ 1.37
PTCD3Q96EY7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.61■■□□□ 1.37
PTCD3Q96EY7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.61■■□□□ 1.37
PTCD3Q96EY7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.61■■□□□ 1.37
PTCD3Q96EY7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
PTCD3Q96EY7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
PTCD3Q96EY7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PTCD3Q96EY7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PTCD3Q96EY7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
PTCD3Q96EY7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.6■■□□□ 1.37
PTCD3Q96EY7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PTCD3Q96EY7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
PTCD3Q96EY7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PTCD3Q96EY7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
PTCD3Q96EY7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.59■■□□□ 1.37
PTCD3Q96EY7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.59■■□□□ 1.37
PTCD3Q96EY7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.59■■□□□ 1.37
PTCD3Q96EY7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.59■■□□□ 1.37
PTCD3Q96EY7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PTCD3Q96EY7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PTCD3Q96EY7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PTCD3Q96EY7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PTCD3Q96EY7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PTCD3Q96EY7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.58■■□□□ 1.36
PTCD3Q96EY7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PTCD3Q96EY7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PTCD3Q96EY7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PTCD3Q96EY7 AC068473.5-201ENST00000616428 2072 ntBASIC23.57■■□□□ 1.36
PTCD3Q96EY7 MIR4449-201ENST00000578365 66 ntBASIC23.57■■□□□ 1.36
PTCD3Q96EY7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
PTCD3Q96EY7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PTCD3Q96EY7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.56■■□□□ 1.36
PTCD3Q96EY7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
PTCD3Q96EY7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PTCD3Q96EY7 AC060814.1-201ENST00000554326 538 ntBASIC23.56■■□□□ 1.36
PTCD3Q96EY7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.56■■□□□ 1.36
PTCD3Q96EY7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTCD3Q96EY7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTCD3Q96EY7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
PTCD3Q96EY7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
PTCD3Q96EY7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PTCD3Q96EY7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.55■■□□□ 1.36
PTCD3Q96EY7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PTCD3Q96EY7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PTCD3Q96EY7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PTCD3Q96EY7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PTCD3Q96EY7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
PTCD3Q96EY7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.55■■□□□ 1.36
PTCD3Q96EY7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
PTCD3Q96EY7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
PTCD3Q96EY7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
PTCD3Q96EY7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PTCD3Q96EY7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PTCD3Q96EY7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PTCD3Q96EY7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PTCD3Q96EY7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
PTCD3Q96EY7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PTCD3Q96EY7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PTCD3Q96EY7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
PTCD3Q96EY7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 1294.4 ms