Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
TRIM43Q96BQ3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TRIM43Q96BQ3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
TRIM43Q96BQ3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.46■■□□□ 1.83
TRIM43Q96BQ3 MTDHP2-201ENST00000601468 714 ntBASIC26.46■■□□□ 1.83
TRIM43Q96BQ3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.46■■□□□ 1.83
TRIM43Q96BQ3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TRIM43Q96BQ3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.45■■□□□ 1.82
TRIM43Q96BQ3 AL512631.2-201ENST00000604634 923 ntBASIC26.45■■□□□ 1.82
TRIM43Q96BQ3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.45■■□□□ 1.82
TRIM43Q96BQ3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TRIM43Q96BQ3 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TRIM43Q96BQ3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.45■■□□□ 1.82
TRIM43Q96BQ3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.44■■□□□ 1.82
TRIM43Q96BQ3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.44■■□□□ 1.82
TRIM43Q96BQ3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM43Q96BQ3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
TRIM43Q96BQ3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.43■■□□□ 1.82
TRIM43Q96BQ3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TRIM43Q96BQ3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TRIM43Q96BQ3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
TRIM43Q96BQ3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM43Q96BQ3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM43Q96BQ3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TRIM43Q96BQ3 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TRIM43Q96BQ3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
TRIM43Q96BQ3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
TRIM43Q96BQ3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.41■■□□□ 1.82
TRIM43Q96BQ3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.41■■□□□ 1.82
TRIM43Q96BQ3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.41■■□□□ 1.82
TRIM43Q96BQ3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
TRIM43Q96BQ3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.4■■□□□ 1.82
TRIM43Q96BQ3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TRIM43Q96BQ3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.4■■□□□ 1.82
TRIM43Q96BQ3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TRIM43Q96BQ3 AC026271.2-201ENST00000428091 497 ntBASIC26.39■■□□□ 1.82
TRIM43Q96BQ3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.39■■□□□ 1.81
TRIM43Q96BQ3 AL449106.1-201ENST00000608517 1980 ntBASIC26.38■■□□□ 1.81
TRIM43Q96BQ3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM43Q96BQ3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.38■■□□□ 1.81
TRIM43Q96BQ3 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.38■■□□□ 1.81
TRIM43Q96BQ3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.38■■□□□ 1.81
TRIM43Q96BQ3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM43Q96BQ3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.37■■□□□ 1.81
TRIM43Q96BQ3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
TRIM43Q96BQ3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM43Q96BQ3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.36■■□□□ 1.81
TRIM43Q96BQ3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
TRIM43Q96BQ3 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.36■■□□□ 1.81
TRIM43Q96BQ3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.36■■□□□ 1.81
TRIM43Q96BQ3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
TRIM43Q96BQ3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
TRIM43Q96BQ3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TRIM43Q96BQ3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TRIM43Q96BQ3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TRIM43Q96BQ3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM43Q96BQ3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM43Q96BQ3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM43Q96BQ3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM43Q96BQ3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM43Q96BQ3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM43Q96BQ3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM43Q96BQ3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.35■■□□□ 1.81
TRIM43Q96BQ3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM43Q96BQ3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.35■■□□□ 1.81
TRIM43Q96BQ3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM43Q96BQ3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM43Q96BQ3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.34■■□□□ 1.81
TRIM43Q96BQ3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
TRIM43Q96BQ3 AC106739.1-201ENST00000617035 715 ntBASIC26.34■■□□□ 1.81
TRIM43Q96BQ3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM43Q96BQ3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM43Q96BQ3 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM43Q96BQ3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.34■■□□□ 1.81
TRIM43Q96BQ3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
TRIM43Q96BQ3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TRIM43Q96BQ3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.33■■□□□ 1.81
TRIM43Q96BQ3 PBX2P1-201ENST00000493219 1291 ntBASIC26.33■■□□□ 1.81
TRIM43Q96BQ3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.33■■□□□ 1.8
TRIM43Q96BQ3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRIM43Q96BQ3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM43Q96BQ3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
TRIM43Q96BQ3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.31■■□□□ 1.8
TRIM43Q96BQ3 AC142381.2-201ENST00000566120 298 ntBASIC26.31■■□□□ 1.8
TRIM43Q96BQ3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.31■■□□□ 1.8
TRIM43Q96BQ3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM43Q96BQ3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM43Q96BQ3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.3■■□□□ 1.8
TRIM43Q96BQ3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM43Q96BQ3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM43Q96BQ3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.3■■□□□ 1.8
TRIM43Q96BQ3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.3■■□□□ 1.8
TRIM43Q96BQ3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.29■■□□□ 1.8
TRIM43Q96BQ3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM43Q96BQ3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
TRIM43Q96BQ3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.29■■□□□ 1.8
TRIM43Q96BQ3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.29■■□□□ 1.8
TRIM43Q96BQ3 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.29■■□□□ 1.8
TRIM43Q96BQ3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.29■■□□□ 1.8
TRIM43Q96BQ3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms