Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRUB1Q8WWH5 AC087741.3-201ENST00000624270 1347 ntBASIC21.8■■□□□ 1.08
TRUB1Q8WWH5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRUB1Q8WWH5 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.79■■□□□ 1.08
TRUB1Q8WWH5 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRUB1Q8WWH5 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.79■■□□□ 1.08
TRUB1Q8WWH5 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.79■■□□□ 1.08
TRUB1Q8WWH5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRUB1Q8WWH5 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRUB1Q8WWH5 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.79■■□□□ 1.08
TRUB1Q8WWH5 AP003733.4-201ENST00000623785 1697 ntBASIC21.79■■□□□ 1.08
TRUB1Q8WWH5 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRUB1Q8WWH5 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRUB1Q8WWH5 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRUB1Q8WWH5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.78■■□□□ 1.08
TRUB1Q8WWH5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRUB1Q8WWH5 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRUB1Q8WWH5 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRUB1Q8WWH5 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.77■■□□□ 1.08
TRUB1Q8WWH5 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRUB1Q8WWH5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
TRUB1Q8WWH5 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
TRUB1Q8WWH5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRUB1Q8WWH5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRUB1Q8WWH5 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRUB1Q8WWH5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.76■■□□□ 1.07
TRUB1Q8WWH5 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.76■■□□□ 1.07
TRUB1Q8WWH5 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRUB1Q8WWH5 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TRUB1Q8WWH5 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRUB1Q8WWH5 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRUB1Q8WWH5 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.75■■□□□ 1.07
TRUB1Q8WWH5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRUB1Q8WWH5 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRUB1Q8WWH5 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRUB1Q8WWH5 AC044849.2-201ENST00000606596 710 ntBASIC21.74■■□□□ 1.07
TRUB1Q8WWH5 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRUB1Q8WWH5 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRUB1Q8WWH5 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRUB1Q8WWH5 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TRUB1Q8WWH5 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRUB1Q8WWH5 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRUB1Q8WWH5 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRUB1Q8WWH5 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TRUB1Q8WWH5 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRUB1Q8WWH5 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.72■■□□□ 1.07
TRUB1Q8WWH5 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRUB1Q8WWH5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRUB1Q8WWH5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRUB1Q8WWH5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRUB1Q8WWH5 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
TRUB1Q8WWH5 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TRUB1Q8WWH5 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.71■■□□□ 1.07
TRUB1Q8WWH5 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.71■■□□□ 1.07
TRUB1Q8WWH5 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRUB1Q8WWH5 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.71■■□□□ 1.07
TRUB1Q8WWH5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRUB1Q8WWH5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TRUB1Q8WWH5 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRUB1Q8WWH5 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRUB1Q8WWH5 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRUB1Q8WWH5 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRUB1Q8WWH5 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRUB1Q8WWH5 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRUB1Q8WWH5 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.7■■□□□ 1.06
TRUB1Q8WWH5 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.7■■□□□ 1.06
TRUB1Q8WWH5 AC021231.2-201ENST00000594613 730 ntBASIC21.7■■□□□ 1.06
TRUB1Q8WWH5 LINC01124-201ENST00000409786 2117 ntBASIC21.7■■□□□ 1.06
TRUB1Q8WWH5 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRUB1Q8WWH5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TRUB1Q8WWH5 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
TRUB1Q8WWH5 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRUB1Q8WWH5 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRUB1Q8WWH5 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRUB1Q8WWH5 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRUB1Q8WWH5 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRUB1Q8WWH5 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRUB1Q8WWH5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.68■■□□□ 1.06
TRUB1Q8WWH5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.68■■□□□ 1.06
TRUB1Q8WWH5 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.68■■□□□ 1.06
TRUB1Q8WWH5 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRUB1Q8WWH5 AC097639.1-201ENST00000565519 1891 ntBASIC21.68■■□□□ 1.06
TRUB1Q8WWH5 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRUB1Q8WWH5 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRUB1Q8WWH5 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRUB1Q8WWH5 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRUB1Q8WWH5 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRUB1Q8WWH5 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
TRUB1Q8WWH5 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRUB1Q8WWH5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
TRUB1Q8WWH5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.67■■□□□ 1.06
TRUB1Q8WWH5 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
TRUB1Q8WWH5 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRUB1Q8WWH5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TRUB1Q8WWH5 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TRUB1Q8WWH5 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRUB1Q8WWH5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRUB1Q8WWH5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.66■■□□□ 1.06
TRUB1Q8WWH5 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRUB1Q8WWH5 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms