Protein–RNA interactions for Protein: Q8NG66

NEK11, Serine/threonine-protein kinase Nek11, humanhuman

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11Q8NG66 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.04■■□□□ 1.76
NEK11Q8NG66 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
NEK11Q8NG66 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
NEK11Q8NG66 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC26.04■■□□□ 1.76
NEK11Q8NG66 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
NEK11Q8NG66 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
NEK11Q8NG66 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
NEK11Q8NG66 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
NEK11Q8NG66 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
NEK11Q8NG66 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NEK11Q8NG66 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
NEK11Q8NG66 MIR7108-201ENST00000614319 87 ntBASIC26.02■■□□□ 1.76
NEK11Q8NG66 AC138932.3-201ENST00000567634 1902 ntBASIC26.02■■□□□ 1.76
NEK11Q8NG66 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
NEK11Q8NG66 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
NEK11Q8NG66 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
NEK11Q8NG66 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
NEK11Q8NG66 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
NEK11Q8NG66 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
NEK11Q8NG66 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
NEK11Q8NG66 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
NEK11Q8NG66 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC26.01■■□□□ 1.75
NEK11Q8NG66 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26■■□□□ 1.75
NEK11Q8NG66 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26■■□□□ 1.75
NEK11Q8NG66 AL157400.5-201ENST00000507624 621 ntBASIC26■■□□□ 1.75
NEK11Q8NG66 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26■■□□□ 1.75
NEK11Q8NG66 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
NEK11Q8NG66 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
NEK11Q8NG66 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
NEK11Q8NG66 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
NEK11Q8NG66 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
NEK11Q8NG66 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
NEK11Q8NG66 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.98■■□□□ 1.75
NEK11Q8NG66 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NEK11Q8NG66 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NEK11Q8NG66 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
NEK11Q8NG66 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NEK11Q8NG66 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NEK11Q8NG66 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
NEK11Q8NG66 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NEK11Q8NG66 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NEK11Q8NG66 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NEK11Q8NG66 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
NEK11Q8NG66 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
NEK11Q8NG66 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
NEK11Q8NG66 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NEK11Q8NG66 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
NEK11Q8NG66 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
NEK11Q8NG66 AC133561.1-201ENST00000568600 2415 ntBASIC25.97■■□□□ 1.75
NEK11Q8NG66 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
NEK11Q8NG66 AC060814.1-201ENST00000554326 538 ntBASIC25.97■■□□□ 1.75
NEK11Q8NG66 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
NEK11Q8NG66 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.97■■□□□ 1.75
NEK11Q8NG66 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC25.97■■□□□ 1.75
NEK11Q8NG66 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
NEK11Q8NG66 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.97■■□□□ 1.75
NEK11Q8NG66 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
NEK11Q8NG66 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.96■■□□□ 1.75
NEK11Q8NG66 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NEK11Q8NG66 AC097639.1-201ENST00000565519 1891 ntBASIC25.96■■□□□ 1.75
NEK11Q8NG66 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NEK11Q8NG66 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
NEK11Q8NG66 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
NEK11Q8NG66 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.96■■□□□ 1.75
NEK11Q8NG66 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
NEK11Q8NG66 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
NEK11Q8NG66 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.96■■□□□ 1.75
NEK11Q8NG66 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
NEK11Q8NG66 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NEK11Q8NG66 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.95■■□□□ 1.75
NEK11Q8NG66 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.95■■□□□ 1.74
NEK11Q8NG66 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
NEK11Q8NG66 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
NEK11Q8NG66 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
NEK11Q8NG66 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.94■■□□□ 1.74
NEK11Q8NG66 AC025884.2-201ENST00000553429 711 ntBASIC25.94■■□□□ 1.74
NEK11Q8NG66 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
NEK11Q8NG66 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
NEK11Q8NG66 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
NEK11Q8NG66 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NEK11Q8NG66 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.93■■□□□ 1.74
NEK11Q8NG66 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
NEK11Q8NG66 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NEK11Q8NG66 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NEK11Q8NG66 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
NEK11Q8NG66 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
NEK11Q8NG66 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
NEK11Q8NG66 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
NEK11Q8NG66 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
NEK11Q8NG66 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
NEK11Q8NG66 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
NEK11Q8NG66 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.91■■□□□ 1.74
NEK11Q8NG66 MIR3960-201ENST00000583311 91 ntBASIC25.91■■□□□ 1.74
NEK11Q8NG66 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
NEK11Q8NG66 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
NEK11Q8NG66 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
NEK11Q8NG66 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.9■■□□□ 1.74
NEK11Q8NG66 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC25.9■■□□□ 1.74
NEK11Q8NG66 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.9■■□□□ 1.74
NEK11Q8NG66 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.9■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms