Protein–RNA interactions for Protein: Q8NFY4

SEMA6D, Semaphorin-6D, humanhuman

Predictions only

Length 1,073 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6DQ8NFY4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SEMA6DQ8NFY4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA6DQ8NFY4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SEMA6DQ8NFY4 MIR3960-201ENST00000583311 91 ntBASIC20.74■□□□□ 0.91
SEMA6DQ8NFY4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA6DQ8NFY4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA6DQ8NFY4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA6DQ8NFY4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SEMA6DQ8NFY4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SEMA6DQ8NFY4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
SEMA6DQ8NFY4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEMA6DQ8NFY4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEMA6DQ8NFY4 SMPD5-203ENST00000639008 1464 ntBASIC20.73■□□□□ 0.91
SEMA6DQ8NFY4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.73■□□□□ 0.91
SEMA6DQ8NFY4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA6DQ8NFY4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SEMA6DQ8NFY4 AC092296.2-201ENST00000589470 999 ntBASIC20.72■□□□□ 0.91
SEMA6DQ8NFY4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA6DQ8NFY4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.72■□□□□ 0.91
SEMA6DQ8NFY4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA6DQ8NFY4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA6DQ8NFY4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.71■□□□□ 0.91
SEMA6DQ8NFY4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
SEMA6DQ8NFY4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA6DQ8NFY4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA6DQ8NFY4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA6DQ8NFY4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
SEMA6DQ8NFY4 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.71■□□□□ 0.91
SEMA6DQ8NFY4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.7■□□□□ 0.91
SEMA6DQ8NFY4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA6DQ8NFY4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA6DQ8NFY4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA6DQ8NFY4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SEMA6DQ8NFY4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA6DQ8NFY4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SEMA6DQ8NFY4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.7■□□□□ 0.9
SEMA6DQ8NFY4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA6DQ8NFY4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA6DQ8NFY4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA6DQ8NFY4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA6DQ8NFY4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA6DQ8NFY4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA6DQ8NFY4 ECEL1P2-201ENST00000461596 1295 ntBASIC20.69■□□□□ 0.9
SEMA6DQ8NFY4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA6DQ8NFY4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA6DQ8NFY4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA6DQ8NFY4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA6DQ8NFY4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA6DQ8NFY4 AC142381.3-201ENST00000568208 1670 ntBASIC20.68■□□□□ 0.9
SEMA6DQ8NFY4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
SEMA6DQ8NFY4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA6DQ8NFY4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA6DQ8NFY4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.68■□□□□ 0.9
SEMA6DQ8NFY4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SEMA6DQ8NFY4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.68■□□□□ 0.9
SEMA6DQ8NFY4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA6DQ8NFY4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA6DQ8NFY4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SEMA6DQ8NFY4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA6DQ8NFY4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.67■□□□□ 0.9
SEMA6DQ8NFY4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA6DQ8NFY4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA6DQ8NFY4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA6DQ8NFY4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SEMA6DQ8NFY4 AC097639.1-201ENST00000565519 1891 ntBASIC20.67■□□□□ 0.9
SEMA6DQ8NFY4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SEMA6DQ8NFY4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA6DQ8NFY4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
SEMA6DQ8NFY4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA6DQ8NFY4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.66■□□□□ 0.9
SEMA6DQ8NFY4 AL033527.3-201ENST00000566366 1196 ntBASIC20.66■□□□□ 0.9
SEMA6DQ8NFY4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.66■□□□□ 0.9
SEMA6DQ8NFY4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SEMA6DQ8NFY4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA6DQ8NFY4 AC022211.4-201ENST00000625094 2161 ntBASIC20.66■□□□□ 0.9
SEMA6DQ8NFY4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA6DQ8NFY4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA6DQ8NFY4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA6DQ8NFY4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA6DQ8NFY4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SEMA6DQ8NFY4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA6DQ8NFY4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA6DQ8NFY4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SEMA6DQ8NFY4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SEMA6DQ8NFY4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.64■□□□□ 0.89
SEMA6DQ8NFY4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.64■□□□□ 0.89
SEMA6DQ8NFY4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA6DQ8NFY4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.63■□□□□ 0.89
SEMA6DQ8NFY4 U85056.1-201ENST00000616429 682 ntBASIC20.63■□□□□ 0.89
SEMA6DQ8NFY4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SEMA6DQ8NFY4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SEMA6DQ8NFY4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.62■□□□□ 0.89
SEMA6DQ8NFY4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA6DQ8NFY4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.62■□□□□ 0.89
SEMA6DQ8NFY4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.62■□□□□ 0.89
SEMA6DQ8NFY4 RP9P-202ENST00000450133 1212 ntBASIC20.62■□□□□ 0.89
SEMA6DQ8NFY4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA6DQ8NFY4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA6DQ8NFY4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SEMA6DQ8NFY4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms