Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNEP1R1Q8N9A8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CNEP1R1Q8N9A8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.23■□□□□ 0.99
CNEP1R1Q8N9A8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNEP1R1Q8N9A8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.23■□□□□ 0.99
CNEP1R1Q8N9A8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
CNEP1R1Q8N9A8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNEP1R1Q8N9A8 AC009299.2-201ENST00000482477 511 ntBASIC21.22■□□□□ 0.99
CNEP1R1Q8N9A8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNEP1R1Q8N9A8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNEP1R1Q8N9A8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNEP1R1Q8N9A8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CNEP1R1Q8N9A8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.21■□□□□ 0.99
CNEP1R1Q8N9A8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CNEP1R1Q8N9A8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.21■□□□□ 0.99
CNEP1R1Q8N9A8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNEP1R1Q8N9A8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CNEP1R1Q8N9A8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.2■□□□□ 0.98
CNEP1R1Q8N9A8 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CNEP1R1Q8N9A8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNEP1R1Q8N9A8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
CNEP1R1Q8N9A8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CNEP1R1Q8N9A8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CNEP1R1Q8N9A8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CNEP1R1Q8N9A8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.19■□□□□ 0.98
CNEP1R1Q8N9A8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.19■□□□□ 0.98
CNEP1R1Q8N9A8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CNEP1R1Q8N9A8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.19■□□□□ 0.98
CNEP1R1Q8N9A8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.19■□□□□ 0.98
CNEP1R1Q8N9A8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CNEP1R1Q8N9A8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNEP1R1Q8N9A8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNEP1R1Q8N9A8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.18■□□□□ 0.98
CNEP1R1Q8N9A8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.18■□□□□ 0.98
CNEP1R1Q8N9A8 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNEP1R1Q8N9A8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNEP1R1Q8N9A8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNEP1R1Q8N9A8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.17■□□□□ 0.98
CNEP1R1Q8N9A8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.17■□□□□ 0.98
CNEP1R1Q8N9A8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CNEP1R1Q8N9A8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNEP1R1Q8N9A8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CNEP1R1Q8N9A8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CNEP1R1Q8N9A8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CNEP1R1Q8N9A8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNEP1R1Q8N9A8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.17■□□□□ 0.98
CNEP1R1Q8N9A8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CNEP1R1Q8N9A8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CNEP1R1Q8N9A8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.16■□□□□ 0.98
CNEP1R1Q8N9A8 AC022616.5-201ENST00000518796 181 ntBASIC21.16■□□□□ 0.98
CNEP1R1Q8N9A8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNEP1R1Q8N9A8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNEP1R1Q8N9A8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNEP1R1Q8N9A8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.15■□□□□ 0.98
CNEP1R1Q8N9A8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNEP1R1Q8N9A8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CNEP1R1Q8N9A8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNEP1R1Q8N9A8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNEP1R1Q8N9A8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNEP1R1Q8N9A8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CNEP1R1Q8N9A8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.14■□□□□ 0.97
CNEP1R1Q8N9A8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNEP1R1Q8N9A8 AL121749.1-202ENST00000609313 2153 ntBASIC21.14■□□□□ 0.97
CNEP1R1Q8N9A8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNEP1R1Q8N9A8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNEP1R1Q8N9A8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CNEP1R1Q8N9A8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNEP1R1Q8N9A8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CNEP1R1Q8N9A8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.13■□□□□ 0.97
CNEP1R1Q8N9A8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.13■□□□□ 0.97
CNEP1R1Q8N9A8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNEP1R1Q8N9A8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNEP1R1Q8N9A8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNEP1R1Q8N9A8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.13■□□□□ 0.97
CNEP1R1Q8N9A8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNEP1R1Q8N9A8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CNEP1R1Q8N9A8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNEP1R1Q8N9A8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CNEP1R1Q8N9A8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNEP1R1Q8N9A8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNEP1R1Q8N9A8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNEP1R1Q8N9A8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.12■□□□□ 0.97
CNEP1R1Q8N9A8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CNEP1R1Q8N9A8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CNEP1R1Q8N9A8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNEP1R1Q8N9A8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.12■□□□□ 0.97
CNEP1R1Q8N9A8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.12■□□□□ 0.97
CNEP1R1Q8N9A8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.12■□□□□ 0.97
CNEP1R1Q8N9A8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CNEP1R1Q8N9A8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNEP1R1Q8N9A8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNEP1R1Q8N9A8 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNEP1R1Q8N9A8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNEP1R1Q8N9A8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CNEP1R1Q8N9A8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
CNEP1R1Q8N9A8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CNEP1R1Q8N9A8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.11■□□□□ 0.97
CNEP1R1Q8N9A8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CNEP1R1Q8N9A8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNEP1R1Q8N9A8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms